RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 OR4F6Q8NGB9 312 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 OR4K1Q8NGD4 311 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ATP6V1E2Q96A05 226 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 GFM1Q96RP9 751 aaKnown RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 NTMT1Q9BV86 223 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CAPS2Q9BXY5 557 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 SPNS1Q9H2V7 528 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 PDP2Q9P2J9 529 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 RNF11Q9Y3C5 154 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MN1Q10571 1320 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ATMQ13315 3056 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 RP1P56715 2156 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 TMEM114B3SHH9 223 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 KLF11O14901 512 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 SNNO75324 88 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-229ENST00000486665 OR4F21O95013 312 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 MLYCDO95822 493 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 MAGP20916 626 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 CCR8P51685 355 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 E2F1Q01094 437 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-229ENST00000486665 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.455e-7■■■■■ 33.1
HDAC6-229ENST00000486665 ILKQ13418 452 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 E2F2Q14209 437 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 TBCCQ15814 346 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 HES3Q5TGS1 186 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 CACHD1Q5VU97 1274 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ATG16L1Q676U5 607 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 LETMD1Q6P1Q0 360 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 GPRIN3Q6ZVF9 776 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 CUZD1Q86UP6 607 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 L3MBTL4Q8NA19 623 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF740Q8NDX6 193 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 OR4D9Q8NGE8 314 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 RAB3IL1Q8TBN0 382 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 LRRC8CQ8TDW0 803 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 AGAP11Q8TF27 550 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZUFSPQ96AP4 578 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 WDR34Q96EX3 536 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF382Q96SR6 550 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 CD180Q99467 661 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 SORT1Q99523 831 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 TRMOQ9BU70 441 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZMYND15Q9H091 742 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ACTR8Q9H981 624 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 SYNPO2LQ9H987 977 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 PELI2Q9HAT8 420 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 FAM60AQ9NP50 221 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 MID1IP1Q9NPA3 183 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 TMEM184CQ9NVA4 438 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 GEMIN8Q9NWZ8 242 aaKnown RBP12.26□□□□□ -0.45
HDAC6-229ENST00000486665 SEMA5BQ9P283 1151 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZDHHC2Q9UIJ5 367 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF490Q9ULM2 529 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-229ENST00000486665 SNX7Q9UNH6 387 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 PCDHGA1Q9Y5H4 931 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 KLK4Q9Y5K2 254 aa12.26□□□□□ -0.45
HDAC6-229ENST00000486665 FLNBO75369 2602 aaKnown RBP12.26□□□□□ -0.45
HDAC6-229ENST00000486665 ASH1LQ9NR48 2969 aaKnown RBP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 KCNE1BA0A087WTH5 132 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 FEZF1A0PJY2 475 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 OR2A25A4D2G3 310 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 D6RAR5 112 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 HAT1O14929 419 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 HCRTR1O43613 425 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 LCMT2O60294 686 aaKnown RBP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 RASSF9O75901 435 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 FKBP9O95302 570 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 CLDN9O95484 217 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 HSPA4LO95757 839 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 OTCP00480 354 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 EBLN1P0CF75 366 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 JUPP14923 745 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SERPINB5P36952 375 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SEPHS1P49903 392 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 FOXA1P55317 472 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 PKNOX1P55347 436 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 NAA20P61599 178 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 OCRLQ01968 901 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 ZFP36L1Q07352 338 aaKnown RBP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SPIDRQ14159 915 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 CLPPQ16740 277 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 LIPJQ5W064 366 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 PRSS42Q7Z5A4 293 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 ARHGAP22Q7Z5H3 698 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 ADCK2Q7Z695 626 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 B3GNT8Q7Z7M8 397 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 SLITRK4Q8IW52 837 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 KLHL6Q8WZ60 621 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 PTCD3Q96EY7 689 aaKnown RBP12.25□□□□□ -0.45
HDAC6-229ENST00000486665 CCDC74BQ96LY2 380 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 KCNA7Q96RP8 456 aa12.25□□□□□ -0.45
HDAC6-229ENST00000486665 DPYSL5Q9BPU6 564 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms