RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 RHBDF1Q96CC6 855 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 ZNF285Q96NJ3 590 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 PLCD4Q9BRC7 762 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 TMEM79Q9BSE2 394 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 PARD6BQ9BYG5 372 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 ULBP3Q9BZM4 244 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 ALG9Q9H6U8 611 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 FANCEQ9HB96 536 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 NMRAL1Q9HBL8 299 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
SSR4-211ENST00000486204 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 PCDHB3Q9Y5E6 796 aa12.36□□□□□ -0.43
SSR4-211ENST00000486204 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
SSR4-211ENST00000486204 TAPBPO15533 448 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 KERAO60938 352 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 SCRG1O75711 98 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 KLHL2O95198 593 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 SNRPAP09012 282 aaKnown RBP12.35□□□□□ -0.43
SSR4-211ENST00000486204 MTHFD2P13995 350 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 NPPBP16860 134 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 ITGA1P56199 1179 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 NAA25Q14CX7 972 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 TECRLQ5HYJ1 363 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 THEMIS2Q5TEJ8 643 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 FRMPD2BQ6IN97 320 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 CAPN13Q6MZZ7 669 aaPredicted RBP12.35□□□□□ -0.43
SSR4-211ENST00000486204 TIFABQ6ZNK6 161 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 GPSM1Q86YR5 675 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
SSR4-211ENST00000486204 GALNT6Q8NCL4 622 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 EGFL8Q99944 293 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 VPS11Q9H270 941 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 ZNF358Q9NW07 568 aa12.35□□□□□ -0.43
SSR4-211ENST00000486204 PSMC3IPQ9P2W1 217 aaPredicted RBP12.35□□□□□ -0.43
SSR4-211ENST00000486204 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 NCF1BA6NI72 391 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 ZNF891A8MT65 544 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 NCF1CA8MVU1 366 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 HAT1O14929 419 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 NKX2-8O15522 239 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 MAP3K7O43318 606 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 SEMA7AO75326 666 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 OR2B3O76000 313 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 NUDT17P0C025 328 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 RNF224P0DH78 156 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 NCF1P14598 390 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 RORAP35398 523 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 GGT5P36269 586 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 GLRBP48167 497 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 HNMTP50135 292 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 RELAQ04206 551 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 GPS2Q13227 327 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ZC3H12BQ5HYM0 836 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 CDKL4Q5MAI5 379 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ZNF385CQ66K41 422 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 FBXO42Q6P3S6 717 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ZNF517Q6ZMY9 492 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 TDRPQ86YL5 185 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 MCATQ8IVS2 390 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 NLGN4XQ8N0W4 816 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 MREGQ8N565 214 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 TEX19Q8NA77 164 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 NLGN4YQ8NFZ3 816 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 RHEBL1Q8TAI7 183 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ALKBH8Q96BT7 664 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 MTBPQ96DY7 904 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 LRFN5Q96NI6 719 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ZFYVE21Q9BQ24 234 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 HAUS8Q9BT25 410 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 SPRTNQ9H040 489 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 PCBD2Q9H0N5 130 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 AKIRIN1Q9H9L7 192 aaPredicted RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 NUDT4Q9NZJ9 180 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 SERTAD3Q9UJW9 196 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
SSR4-211ENST00000486204 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 ASB1Q9Y576 335 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 PCSK5Q92824 1860 aa12.34□□□□□ -0.43
SSR4-211ENST00000486204 LOC105369274A0A096LPK9 316 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 LOC102723532A0A0G2JNH3 316 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 E7EQ34 232 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 H7BY64 318 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 UBXN8O00124 270 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 ZSCAN9O15535 394 aaPredicted RBP12.33□□□□□ -0.44
SSR4-211ENST00000486204 ZNF749O43361 778 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 CDH1P12830 882 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.44
SSR4-211ENST00000486204 STAT5AP42229 794 aa12.33□□□□□ -0.44
SSR4-211ENST00000486204 GDF5P43026 501 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms