RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ASB1Q9Y576 335 aa10.92□□□□□ -0.66
NUP50-216ENST00000486184 SPTBN2O15020 2390 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TRBC2A0A5B9 178 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 MED19A0JLT2 244 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 FEZF1A0PJY2 475 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 PMS2P1A4D2B8 440 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 LRRC14BA6NHZ5 514 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 G3V2L1 256 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 AGPSO00116 658 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 E2F3O00716 465 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TXNDC9O14530 226 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 PRPF4O43172 522 aaKnown RBP eCLIP10.91□□□□□ -0.66
NUP50-216ENST00000486184 OR1F1O43749 312 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TYROBPO43914 113 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 SRPX2O60687 465 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 CTSVO60911 334 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 SCRG1O75711 98 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 EIF2S1P05198 315 aaKnown RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 RPS17P08708 135 aaKnown RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 MSL3P1P0C860 447 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 FGF5P12034 268 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 NEFHP12036 1026 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 IMPDH1P20839 514 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 ETV5P41161 510 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 VSX2P58304 361 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 CSNK1G2P78368 415 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 SHC2P98077 582 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 REEP5Q00765 189 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 RELAQ04206 551 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 GPS2Q13227 327 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 SLBPQ14493 270 aaKnown RBP eCLIP10.91□□□□□ -0.66
NUP50-216ENST00000486184 RTP5Q14D33 572 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 RBBP5Q15291 538 aaKnown RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.91□□□□□ -0.66
NUP50-216ENST00000486184 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 ZNF678Q5SXM1 525 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 HHATQ5VTY9 493 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 LIPMQ5VYY2 423 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 PLD3Q8IV08 490 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TMEM151AQ8N4L1 468 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 ANKRD42Q8N9B4 389 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 PPP1R14CQ8TAE6 165 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 UBE2E3Q969T4 207 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TLCD1Q96CP7 247 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 ZNF501Q96CX3 271 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 THAP11Q96EK4 314 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 L3HYPDHQ96EM0 354 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 MAGEB10Q96LZ2 347 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 TMEM237Q96Q45 408 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 PAIP2Q9BPZ3 127 aaKnown RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 PITHD1Q9GZP4 211 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 EHD1Q9H4M9 534 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 NOL11Q9H8H0 719 aaKnown RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 APMAPQ9HDC9 416 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 SEMA4BQ9NPR2 832 aaPredicted RBP10.91□□□□□ -0.66
NUP50-216ENST00000486184 OXSMQ9NWU1 459 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 WASF3Q9UPY6 502 aa10.91□□□□□ -0.66
NUP50-216ENST00000486184 TMEM120BA0PK00 339 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 ZSCAN9O15535 394 aaPredicted RBP10.9□□□□□ -0.66
NUP50-216ENST00000486184 NRP2O60462 931 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 BRINP1O60477 761 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 UGDHO60701 494 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 TRIM13O60858 407 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SASH3O75995 380 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 MLYCDO95822 493 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 OTCP00480 354 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SERPIND1P05546 499 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 HBQ1P09105 142 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SLC35G6P0C7Q6 338 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 VARSP26640 1264 aaKnown RBP10.9□□□□□ -0.66
NUP50-216ENST00000486184 HPDP32754 393 aaPredicted RBP10.9□□□□□ -0.66
NUP50-216ENST00000486184 HNF4AP41235 474 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 DNAJB13P59910 316 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 PHEXP78562 749 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 CLCQ05315 142 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 DOC2AQ14183 400 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 GRM7Q14831 915 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 PCLAFQ15004 111 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 FRMPD2BQ6IN97 320 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 TLDC1Q6P9B6 456 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 IGF2-ASQ6U949 168 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 TMIGD1Q6UXZ0 262 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SLCO4C1Q6ZQN7 724 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 C10orf107Q8IVU9 208 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 MFSD9Q8NBP5 474 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 TTLQ8NG68 377 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 OR4K1Q8NGD4 311 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 OR1L3Q8NH93 324 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 ZNF483Q8TF39 744 aaPredicted RBP10.9□□□□□ -0.66
NUP50-216ENST00000486184 CCT6BQ92526 530 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 ARL8AQ96BM9 186 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 REPS1Q96D71 796 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SLC46A1Q96NT5 459 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 FCRL4Q96PJ5 515 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SH3GL2Q99962 352 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 NDC1Q9BTX1 674 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 C1QTNF3Q9BXJ4 246 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms