RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CSNK1G2P78368 415 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 CDKL1Q00532 357 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 CHAF1BQ13112 559 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 LACTB2Q53H82 288 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-205ENST00000485746 MROH9Q5TGP6 573 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 PRICKLE2Q7Z3G6 844 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 PTRH1Q86Y79 214 aaKnown RBP11.93□□□□□ -0.5
PTCD1-205ENST00000485746 PRSS58Q8IYP2 241 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 CAMKVQ8NCB2 501 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 OR2Y1Q8NGV0 311 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 SLC5A11Q8WWX8 675 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 EXT2Q93063 718 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 MIEF2Q96C03 454 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 ABHD17AQ96GS6 310 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 VPS50Q96JG6 964 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 FER1L6-AS2Q96M78 137 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 TSNARE1Q96NA8 513 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 RHOXF2Q9BQY4 288 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 MCMBPQ9BTE3 642 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 DRC3Q9H069 523 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 ING2Q9H160 280 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 SOX17Q9H6I2 414 aaPredicted RBP11.93□□□□□ -0.5
PTCD1-205ENST00000485746 WWOXQ9NZC7 414 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 NXT1Q9UKK6 140 aaKnown RBP11.93□□□□□ -0.5
PTCD1-205ENST00000485746 SH2B3Q9UQQ2 575 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 KCNE2Q9Y6J6 123 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 B8ZZF3 427 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 KLF7O75840 302 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 DNAJB5O75953 348 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 C1QL1O75973 258 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 BCL6P41182 706 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 GCGRP47871 477 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 EMP3P54852 163 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 MEF2AQ02078 507 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 ATP1A4Q13733 1029 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 BMPR2Q13873 1038 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 RBBP5Q15291 538 aaKnown RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 NKG7Q16617 165 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 PPP1R3AQ16821 1122 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 CPZQ66K79 652 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 SHISA6Q6ZSJ9 500 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 MED25Q71SY5 747 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 TAOK1Q7L7X3 1001 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 ASPGQ86U10 573 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 TCAIMQ8N3R3 496 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 DTWD1Q8N5C7 304 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 TMEM102Q8N9M5 508 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 UHMK1Q8TAS1 419 aaKnown RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 SLC13A3Q8WWT9 602 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 C10orf90Q96M02 699 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 AIF1LQ9BQI0 150 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 SLC25A23Q9BV35 468 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 CDC42EP4Q9H3Q1 356 aaKnown RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 WDR54Q9H977 334 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 CNOT10Q9H9A5 744 aaKnown RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 NMRAL1Q9HBL8 299 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 SLC22A11Q9NSA0 550 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 TRPC4Q9UBN4 977 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF282Q9UDV7 671 aaPredicted RBP11.92□□□□□ -0.5
PTCD1-205ENST00000485746 NFU1Q9UMS0 254 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 SLC22A14Q9Y267 594 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 LAMA5O15230 3695 aa11.92□□□□□ -0.5
PTCD1-205ENST00000485746 NBEAQ8NFP9 2946 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 KCNE1BA0A087WTH5 132 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 A0A087X1B8 175 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 A0A0A6YYC8 382 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-205ENST00000485746 SUPT3HB4E1H0 165 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 I3L1I5 382 aaPredicted RBP11.91□□□□□ -0.5
PTCD1-205ENST00000485746 CLGNO14967 610 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 P2RX6O15547 441 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 LCMT2O60294 686 aaKnown RBP11.91□□□□□ -0.5
PTCD1-205ENST00000485746 SUPT3HO75486 399 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 MED26O95402 600 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 C1QAP02745 245 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 LTA4HP09960 611 aaKnown RBP11.91□□□□□ -0.5
PTCD1-205ENST00000485746 SLC35G6P0C7Q6 338 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 CD1DP15813 335 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 TYK2P29597 1187 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 MSH2P43246 934 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 FOXL2P58012 376 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 RGS1Q08116 209 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 TGFBIQ15582 683 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 RBBP7Q16576 425 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 CATSPEREQ5SY80 951 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 SULT1C3Q6IMI6 304 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 NXPE4Q6UWF7 544 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 COX15Q7KZN9 410 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 CMC1Q7Z7K0 106 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 MRGPREQ86SM8 312 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 TMPRSS11BQ86T26 416 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 RELL1Q8IUW5 271 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 MFSD9Q8NBP5 474 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
PTCD1-205ENST00000485746 ZCCHC10Q8TBK6 192 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms