RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 FOLR3P41439 243 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ARF3P61204 181 aaPredicted RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 YBX1P67809 324 aaKnown RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 ERV3-1Q14264 604 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ACAP2Q15057 778 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 NKAIN1Q4KMZ8 207 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 GARNL3Q5VVW2 1013 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 SULT1C3Q6IMI6 304 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 FRMPD2BQ6IN97 320 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 PRMT9Q6P2P2 845 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 BORAQ6PGQ7 559 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ZNF517Q6ZMY9 492 aaPredicted RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 TMPRSS11BQ86T26 416 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 CSNK1A1LQ8N752 337 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ENDOVQ8N8Q3 282 aaKnown RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 CAMKVQ8NCB2 501 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 LSM14AQ8ND56 463 aaKnown RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 UBLCP1Q8WVY7 318 aaPredicted RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 SLC5A11Q8WWX8 675 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 EXT2Q93063 718 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 COL26A1Q96A83 441 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 RHBDF1Q96CC6 855 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 NXNL1Q96CM4 212 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 MTBPQ96DY7 904 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 MVB12AQ96EY5 273 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 GBP5Q96PP8 586 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 AIF1LQ9BQI0 150 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 VPS11Q9H270 941 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ACTL8Q9H568 366 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 ALG9Q9H6U8 611 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 AKIRIN1Q9H9L7 192 aaPredicted RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 ZNF304Q9HCX3 659 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 STARD5Q9NSY2 213 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 NUDT4Q9NZJ9 180 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 IL17BQ9UHF5 180 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 POLHQ9Y253 713 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 SLC22A14Q9Y267 594 aa7.47□□□□□ -1.21
MACF1-220ENST00000485063 MRPS18BQ9Y676 258 aaKnown RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
MACF1-220ENST00000485063 FRYQ5TBA9 3013 aa7.46□□□□□ -1.21
MACF1-220ENST00000485063 APC2O95996 2303 aa7.46□□□□□ -1.21
MACF1-220ENST00000485063 CHD8Q9HCK8 2581 aa7.46□□□□□ -1.21
MACF1-220ENST00000485063 KCNE1BA0A087WTH5 132 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 LOC105369274A0A096LPK9 316 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 LOC102723532A0A0G2JNH3 316 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 TRBC2A0A5B9 178 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CDC14CA4D256 554 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 FITM1A5D6W6 292 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 URADA6NGE7 173 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 NKX2-8O15522 239 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 OR1F1O43749 312 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CCNT2O60583 730 aaKnown RBP7.46□□□□□ -1.22
MACF1-220ENST00000485063 KERAO60938 352 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 STK16O75716 305 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 KLHL2O95198 593 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 ALBP02768 609 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 RBP1P09455 135 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 FAM153BP0C7A2 387 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 SFTPCP11686 197 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 COL6A2P12110 1019 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 GFAPP14136 432 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 WT1P19544 449 aaPredicted RBP7.46□□□□□ -1.22
MACF1-220ENST00000485063 ITGAXP20702 1163 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 F8A1P23610 371 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CCR10P46092 362 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 AVPR1BP47901 424 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 SKP1P63208 163 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CYP4F2P78329 520 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CSNK1G2P78368 415 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 OCA2Q04671 838 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 CDC16Q13042 620 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 SLC29A2Q14542 456 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 SSPNQ14714 243 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 NCF4Q15080 339 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 OR4D1Q15615 310 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 HIST2H2ACQ16777 129 aaPredicted RBP7.46□□□□□ -1.22
MACF1-220ENST00000485063 UGT8Q16880 541 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 TSNAXIP1Q2TAA8 658 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 FAM153CQ494X1 144 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 ZNF385CQ66K41 422 aaPredicted RBP7.46□□□□□ -1.22
MACF1-220ENST00000485063 HIST2H2AA3Q6FI13 130 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 NIPAL1Q6NVV3 410 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 ASPGQ86U10 573 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 ISCA2Q86U28 154 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 RAB43Q86YS6 212 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 PLD3Q8IV08 490 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 OR4N4Q8N0Y3 316 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 KRT78Q8N1N4 520 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 SNX31Q8N9S9 440 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 PDPRQ8NCN5 879 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 LRRN4CLQ8ND94 238 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 ABHD11Q8NFV4 315 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 RHEBL1Q8TAI7 183 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 DCAKDQ8WVC6 231 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 KCTD4Q8WVF5 259 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 APOBEC4Q8WW27 367 aaKnown RBP7.46□□□□□ -1.22
MACF1-220ENST00000485063 SLC13A3Q8WWT9 602 aa7.46□□□□□ -1.22
MACF1-220ENST00000485063 THAP4Q8WY91 577 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms