RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 AOAHP28039 575 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ALDH4A1P30038 563 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 HMOX2P30519 316 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CCR7P32248 378 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CSF2RBP32927 897 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 AGTR2P50052 363 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 HNMTP50135 292 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CTSCP53634 463 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 AP1S2P56377 157 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GABREP78334 506 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CDKL1Q00532 357 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 B4GALNT1Q00973 533 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PLOD1Q02809 727 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GSTM4Q03013 218 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GTF2H2Q13888 395 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 FASTKQ14296 549 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ISXQ2M1V0 245 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GTF2H2CQ6P1K8 395 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 DUS1LQ6P1R4 473 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 USP53Q70EK8 1073 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CHSY3Q70JA7 882 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 SPRED1Q7Z699 444 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 NLRP8Q86W28 1048 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 SNX32Q86XE0 403 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ARL14Q8N4G2 192 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 POU5F2Q8N7G0 328 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 FAM13CQ8NE31 585 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 METTL6Q8TCB7 284 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 MCOLN3Q8TDD5 553 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PMEPA1Q969W9 287 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM159Q96B96 161 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 TUBGCP3Q96CW5 907 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF514Q96K75 400 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 NRTNQ99748 197 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 MIPEPQ99797 713 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 MRPL1Q9BYD6 325 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 GSDMCQ9BYG8 508 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 CD244Q9BZW8 370 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 SEMA6CQ9H3T2 930 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PARVBQ9HBI1 364 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PRDM8Q9NQV8 689 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 ARL15Q9NXU5 204 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 BCAP29Q9UHQ4 241 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 PTBP2Q9UKA9 531 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 DNAJC15Q9Y5T4 150 aa6.71□□□□□ -1.34
BRCA1-216ENST00000484087 COPG1Q9Y678 874 aaKnown RBP6.71□□□□□ -1.34
BRCA1-216ENST00000484087 LRRC14BA6NHZ5 514 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 OR52A4PA6NMU1 304 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 D6RAR5 112 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PSMD12O00232 456 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 AIM2O14862 343 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PIP5K1BO14986 540 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CHUKO15111 745 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 B4GAT1O43505 415 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 STK16O75716 305 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 DXOO77932 396 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CATP04040 527 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 JUNP05412 331 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 GP1BAP07359 652 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TEAD1P28347 426 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ETV5P41161 510 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 HSPA7P48741 367 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PPM1FP49593 454 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PRLHRP49683 370 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 NUDT2P50583 147 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 DUSP3P51452 185 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 RAP1GDS1P52306 607 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CFHR1Q03591 330 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM115Q12893 351 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SRSF6Q13247 344 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ILKQ13418 452 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SPIDRQ14159 915 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 GSTA3Q16772 222 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PPP1R3AQ16821 1122 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TRMT5Q32P41 509 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM198Q66K66 360 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CYHR1Q6ZMK1 362 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 RBM44Q6ZP01 1051 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 FAM83HQ6ZRV2 1179 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 LRRC70Q7Z2Q7 622 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 GOLGA7Q7Z5G4 137 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SPATA19Q7Z5L4 167 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 NET1Q7Z628 596 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 MILR1Q7Z6M3 343 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 C11orf96Q7Z7L8 435 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SYVN1Q86TM6 617 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TRAPPC5Q8IUR0 188 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ULK2Q8IYT8 1036 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 MIER2Q8N344 545 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 RASGEF1AQ8N9B8 481 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 KDF1Q8NAX2 398 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 MAGEC3Q8TD91 643 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms