RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GRK3P35626 688 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 BCL6P41182 706 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 TSPAN7P41732 249 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 ETV4P43268 484 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 NAGLUP54802 743 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 VSX2P58304 361 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-224ENST00000483359 DOC2AQ14183 400 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 RBBP7Q16576 425 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.32
CPNE1-224ENST00000483359 FAM219BQ5XKK7 198 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PPP1R3BQ86XI6 285 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 TRPC4APQ8TEL6 797 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF483Q8TF39 744 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
CPNE1-224ENST00000483359 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 ACTR8Q9H981 624 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PELI2Q9HAT8 420 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 GEMIN8Q9NWZ8 242 aaKnown RBP17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PLCL2Q9UPR0 1127 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 MSRB2Q9Y3D2 182 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 PCDHGA8Q9Y5G5 932 aa17.08■□□□□ 0.32
CPNE1-224ENST00000483359 CELSR3Q9NYQ7 3312 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 OR7A17O14581 309 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 TM9SF1O15321 606 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 OR1F1O43749 312 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
CPNE1-224ENST00000483359 ZWINTO95229 277 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 PIK3CGP48736 1102 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 RBBP5Q15291 538 aaKnown RBP17.07■□□□□ 0.32
CPNE1-224ENST00000483359 DCAF12Q5T6F0 453 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 LIPMQ5VYY2 423 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 ATG9BQ674R7 924 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 NXPE2Q96DL1 559 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 L3HYPDHQ96EM0 354 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 MACROD1Q9BQ69 325 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 AIF1LQ9BQI0 150 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 NRSN2Q9GZP1 204 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 CHRNA10Q9GZZ6 450 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 SPRTNQ9H040 489 aaPredicted RBP17.07■□□□□ 0.32
CPNE1-224ENST00000483359 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 FBXO8Q9NRD0 319 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 FOXJ2Q9P0K8 574 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 ANGPTL2Q9UKU9 493 aa17.07■□□□□ 0.32
CPNE1-224ENST00000483359 A0A1B0GTL3 188 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 C9orf172C9J069 976 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 BRINP1O60477 761 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 OR2B3O76000 313 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 RBMS1P29558 406 aaKnown RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CCR10P46092 362 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 SERPINB4P48594 390 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CCNG1P51959 295 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 RAB15P59190 212 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CYP4F2P78329 520 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 REEP5Q00765 189 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CLCQ05315 142 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ADNP2Q6IQ32 1131 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 OR4K1Q8NGD4 311 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 OR2A5Q96R48 311 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 TAAR9Q96RI9 348 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 C1QTNF3Q9BXJ4 246 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 MDC1Q14676 2089 aaKnown RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 FRYQ5TBA9 3013 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CEP295Q9C0D2 2601 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 H0YGG7 62 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ITGA1P56199 1179 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ARF3P61204 181 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 RPS15AP62244 130 aaKnown RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 IL11RAQ14626 422 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CFAP157Q5JU67 520 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 TMEM164Q5U3C3 297 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 PWWP2BQ6NUJ5 590 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 METTL2BQ6P1Q9 378 aaKnown RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 CEACAM20Q6UY09 585 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ERMP1Q7Z2K6 904 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 TMEM126BQ8IUX1 230 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 GPR135Q8IZ08 494 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 ZNF655Q8N720 491 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 RERGQ96A58 199 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 PTCD3Q96EY7 689 aaKnown RBP17.06■□□□□ 0.32
CPNE1-224ENST00000483359 SLC46A1Q96NT5 459 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 GSTO2Q9H4Y5 243 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 PCDHGA4Q9Y5G9 962 aa17.06■□□□□ 0.32
CPNE1-224ENST00000483359 HMGB1P1B2RPK0 211 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-224ENST00000483359 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 SERPIND1P05546 499 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 MSL3P1P0C860 447 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 FGF5P12034 268 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 HKDC1Q2TB90 917 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 CYB5D1Q6P9G0 228 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 ANKRD53Q8N9V6 530 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 SHCBP1LQ9BZQ2 653 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 SERTAD3Q9UJW9 196 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 RNF11Q9Y3C5 154 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 SPTBP11277 2137 aa17.05■□□□□ 0.32
CPNE1-224ENST00000483359 TRBC2A0A5B9 178 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 P2RX6O15547 441 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 TRIM13O60858 407 aa17.04■□□□□ 0.32
CPNE1-224ENST00000483359 H2AFYO75367 372 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms