RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 XRCC4Q13426 336 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 STILQ15468 1287 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 FIGNQ5HY92 759 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 HENMT1Q5T8I9 393 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 KRT39Q6A163 491 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 NXNQ6DKJ4 435 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 OLFML1Q6UWY5 402 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 PLXDC2Q6UX71 529 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 NDUFAF2Q8N183 169 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 TMEM174Q8WUU8 243 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 ANP32BQ92688 251 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 MSI2Q96DH6 328 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 TRMT61AQ96FX7 289 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 MPP4Q96JB8 637 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 WFIKKN1Q96NZ8 548 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 CPXM1Q96SM3 734 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 DNAJC7Q99615 494 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 WDR83Q9BRX9 315 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 RHNO1Q9BSD3 238 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 RBM24Q9BX46 236 aaKnown RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 GOLPH3LQ9H4A5 285 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 KIR3DX1Q9H7L2 352 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 FN3KRPQ9HA64 309 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 KCNK13Q9HB14 408 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 ASNSD1Q9NWL6 643 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 KLHL28Q9NXS3 571 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 ZNF629Q9UEG4 869 aaPredicted RBP6.01□□□□□ -1.45
CHD6-209ENST00000482596 OR12D3Q9UGF7 316 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 ACSL5Q9ULC5 683 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 AP4E1Q9UPM8 1137 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 PCDHB4Q9Y5E5 795 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 ACTL7BQ9Y614 415 aa6.01□□□□□ -1.45
CHD6-209ENST00000482596 DNAH9Q9NYC9 4486 aa6□□□□□ -1.45
CHD6-209ENST00000482596 LOC102723996A0A087X1L8 192 aa6□□□□□ -1.45
CHD6-209ENST00000482596 A0A0A6YYJ9 748 aa6□□□□□ -1.45
CHD6-209ENST00000482596 PINLYPA6NC86 204 aa6□□□□□ -1.45
CHD6-209ENST00000482596 RBMY1BA6NDE4 496 aaKnown RBP6□□□□□ -1.45
CHD6-209ENST00000482596 RBMY1EA6NEQ0 496 aaKnown RBP6□□□□□ -1.45
CHD6-209ENST00000482596 WASH4PA8MWX3 477 aa6□□□□□ -1.45
CHD6-209ENST00000482596 SLCO1B7G3V0H7 640 aa6□□□□□ -1.45
CHD6-209ENST00000482596 FOXN3O00409 490 aaPredicted RBP6□□□□□ -1.45
CHD6-209ENST00000482596 PDXKO00764 312 aa6□□□□□ -1.45
CHD6-209ENST00000482596 AKAP10O43572 662 aa6□□□□□ -1.45
CHD6-209ENST00000482596 CALUO43852 315 aaPredicted RBP6□□□□□ -1.45
CHD6-209ENST00000482596 SSX4O60224 188 aa6□□□□□ -1.45
CHD6-209ENST00000482596 PALMO75781 387 aa6□□□□□ -1.45
CHD6-209ENST00000482596 LRIG2O94898 1065 aa6□□□□□ -1.45
CHD6-209ENST00000482596 SLC25A14O95258 325 aaPredicted RBP6□□□□□ -1.45
CHD6-209ENST00000482596 NR3C1P04150 777 aa6□□□□□ -1.45
CHD6-209ENST00000482596 HNRNPCP07910 306 aaKnown RBP eCLIP6□□□□□ -1.451e-7■■■■■ 27.7
CHD6-209ENST00000482596 RBMY1DP0C7P1 496 aaKnown RBP6□□□□□ -1.45
CHD6-209ENST00000482596 ICAM2P13598 275 aa6□□□□□ -1.45
CHD6-209ENST00000482596 ITGA8P53708 1063 aa6□□□□□ -1.45
CHD6-209ENST00000482596 OCA2Q04671 838 aa6□□□□□ -1.45
CHD6-209ENST00000482596 PDCLQ13371 301 aa6□□□□□ -1.45
CHD6-209ENST00000482596 NXPE4Q6UWF7 544 aa6□□□□□ -1.45
CHD6-209ENST00000482596 MAATS1Q7Z4T9 603 aa6□□□□□ -1.45
CHD6-209ENST00000482596 LUZP2Q86TE4 346 aa6□□□□□ -1.45
CHD6-209ENST00000482596 ANKRD13BQ86YJ7 626 aa6□□□□□ -1.45
CHD6-209ENST00000482596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6□□□□□ -1.453e-9■■■■■ 348.1
CHD6-209ENST00000482596 DNAJC22Q8N4W6 341 aa6□□□□□ -1.45
CHD6-209ENST00000482596 ANKRD42Q8N9B4 389 aa6□□□□□ -1.45
CHD6-209ENST00000482596 ZFP62Q8NB50 900 aaPredicted RBP6□□□□□ -1.45
CHD6-209ENST00000482596 DLG3Q92796 817 aa6□□□□□ -1.45
CHD6-209ENST00000482596 KAT5Q92993 513 aa6□□□□□ -1.45
CHD6-209ENST00000482596 NT5C3BQ969T7 300 aa6□□□□□ -1.45
CHD6-209ENST00000482596 CFAP57Q96MR6 1250 aa6□□□□□ -1.45
CHD6-209ENST00000482596 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
CHD6-209ENST00000482596 ZFYVE21Q9BQ24 234 aa6□□□□□ -1.45
CHD6-209ENST00000482596 TUBB6Q9BUF5 446 aa6□□□□□ -1.45
CHD6-209ENST00000482596 TRIM39Q9HCM9 518 aa6□□□□□ -1.45
CHD6-209ENST00000482596 CUTCQ9NTM9 273 aa6□□□□□ -1.45
CHD6-209ENST00000482596 RMND1Q9NWS8 449 aa6□□□□□ -1.45
CHD6-209ENST00000482596 HOOK1Q9UJC3 728 aaKnown RBP6□□□□□ -1.45
CHD6-209ENST00000482596 TRHDEQ9UKU6 1024 aa6□□□□□ -1.45
CHD6-209ENST00000482596 PTGDR2Q9Y5Y4 395 aa6□□□□□ -1.45
CHD6-209ENST00000482596 NFS1Q9Y697 457 aa6□□□□□ -1.45
CHD6-209ENST00000482596 FREM3P0C091 2139 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.99□□□□□ -1.45
CHD6-209ENST00000482596 KLRC4-KLRK1H3BQV0 150 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 TMCC2O75069 709 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 SMC2O95347 1197 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 CLDN7O95471 211 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 F13BP05160 661 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 PDHA1P08559 390 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 CELA3AP09093 270 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 RAB6AP20340 208 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 CRYGSP22914 178 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 RPL13P26373 211 aaKnown RBP5.99□□□□□ -1.45
CHD6-209ENST00000482596 SRP14P37108 136 aaKnown RBP5.99□□□□□ -1.45
CHD6-209ENST00000482596 ANP32AP39687 249 aaKnown RBP5.99□□□□□ -1.45
CHD6-209ENST00000482596 MC3RP41968 323 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 MXI1P50539 228 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 ARSFP54793 590 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 MTTPP55157 894 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 YWHAEP62258 255 aaKnown RBP5.99□□□□□ -1.45
CHD6-209ENST00000482596 AP2B1P63010 937 aa5.99□□□□□ -1.45
CHD6-209ENST00000482596 DSC2Q02487 901 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms