RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 EGFP01133 1207 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 SDC1P18827 310 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 NUP107P57740 925 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 TFF2Q03403 129 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 USP51Q70EK9 711 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 DSG4Q86SJ6 1040 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 PHACTR4Q8IZ21 702 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 L3MBTL4Q8NA19 623 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 ZNF740Q8NDX6 193 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 DPY30Q9C005 99 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 RSPH9Q9H1X1 276 aaPredicted RBP13.96□□□□□ -0.18
CHD3-211ENST00000481999 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.18
CHD3-211ENST00000481999 EIF3LQ9Y262 564 aaKnown RBP13.96□□□□□ -0.18
CHD3-211ENST00000481999 TDRKHQ9Y2W6 561 aaKnown RBP13.96□□□□□ -0.18
CHD3-211ENST00000481999 DENND4AQ7Z401 1863 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 SLC16A5O15375 505 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 DEAF1O75398 565 aaPredicted RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 CLIC3O95833 236 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 PGRP06401 933 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ANXA6P08133 673 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 PON2Q15165 354 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 OFCC1Q8IZS5 231 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 DTWD1Q8N5C7 304 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 GPR156Q8NFN8 814 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 FAM81AQ8TBF8 368 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 SLC13A3Q8WWT9 602 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ISOC1Q96CN7 298 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 TTYH1Q9H313 450 aaPredicted RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 LIN28AQ9H9Z2 209 aaKnown RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 SNX6Q9UNH7 406 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ASF1AQ9Y294 204 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 PRAMEF33A0A0G2JMD5 474 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 RAP2AP10114 183 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 PCNAP12004 261 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ADARB1P78563 741 aaKnown RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 IRF4Q15306 451 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 FAM98BQ52LJ0 330 aaKnown RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 CHST15Q7LFX5 561 aaPredicted RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 GPR180Q86V85 440 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 MSRB3Q8IXL7 192 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 TCAIMQ8N3R3 496 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 KIAA1958Q8N8K9 716 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 OR14C36Q8NHC7 312 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 GTF2H4Q92759 462 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 CCDC138Q96M89 665 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 CCDC115Q96NT0 180 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 INPP5KQ9BT40 448 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 NPLQ9BXD5 320 aaPredicted RBP13.95□□□□□ -0.18
CHD3-211ENST00000481999 SLC29A3Q9BZD2 475 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 ZDHHC5Q9C0B5 715 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 FBXL12Q9NXK8 326 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
CHD3-211ENST00000481999 KCNH1O95259 989 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 SNAP29O95721 258 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 ALBP02768 609 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 JUPP14923 745 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 GGT1P19440 569 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CDKN2CP42773 168 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 MAD2L1Q13257 205 aaPredicted RBP13.94□□□□□ -0.18
CHD3-211ENST00000481999 CAMK2GQ13555 558 aaPredicted RBP13.94□□□□□ -0.18
CHD3-211ENST00000481999 SMU1Q2TAY7 513 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 PGS1Q32NB8 556 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 BCL7AQ4VC05 210 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CDKL4Q5MAI5 379 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 DHRS4L2Q6PKH6 230 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 GALNT13Q8IUC8 556 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 WDR20Q8TBZ3 569 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 TBCDQ9BTW9 1192 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CXorf21Q9HAI6 301 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 ERVK-11Q9UQG0 969 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 QSOX1O00391 747 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 PRSS23O95084 383 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 NPPBP16860 134 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 RPS14P62263 151 aaKnown RBP13.94□□□□□ -0.18
CHD3-211ENST00000481999 CHRNB3Q05901 458 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 GTF2H3Q13889 308 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 PYCR3Q53H96 274 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CCNYL2Q5T2Q4 361 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CACHD1Q5VU97 1274 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 OR7A2PQ8NGA2 310 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 ZNF420Q8TAQ5 688 aaPredicted RBP13.94□□□□□ -0.18
CHD3-211ENST00000481999 PNPT1Q8TCS8 783 aaKnown RBP13.94□□□□□ -0.18
CHD3-211ENST00000481999 COX14Q96I36 57 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 OR52E6Q96RD3 313 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CLMPQ9H6B4 373 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 SGK2Q9HBY8 427 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 WDR37Q9Y2I8 494 aa13.94□□□□□ -0.18
CHD3-211ENST00000481999 CFAP54Q96N23 3096 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 SLC31A1O15431 190 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 AMD1P17707 334 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 PSMB5P28074 263 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ACADLP28330 430 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 CTHP32929 405 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms