RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 MFSD3Q96ES6 412 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 THOC3Q96J01 351 aaKnown RBP8.59□□□□□ -1.03
HLA-B-253ENST00000481849 PANX3Q96QZ0 392 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 WDR77Q9BQA1 342 aaPredicted RBP8.59□□□□□ -1.03
HLA-B-253ENST00000481849 ACAT2Q9BWD1 397 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 TSGA10Q9BZW7 698 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 WDR54Q9H977 334 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 TREX1Q9NSU2 369 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 ABCF3Q9NUQ8 709 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 SYBUQ9NX95 663 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
HLA-B-253ENST00000481849 TCRBV7S3A2A0A539 114 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 PRICKLE3O43900 615 aaPredicted RBP8.58□□□□□ -1.04
HLA-B-253ENST00000481849 KLHL41O60662 606 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 AVILO75366 819 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CLDN1O95832 211 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 ERVK-10P10266 1014 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CHRM3P20309 590 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 NPY2RP49146 381 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 VPS41P49754 854 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 SOX8P57073 446 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CDC16Q13042 620 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CCNG2Q16589 344 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 FAM214AQ32MH5 1076 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 TUBB8Q3ZCM7 444 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 MEI1Q5TIA1 1274 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 AGAP7PQ5VUJ5 663 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 FAAH2Q6GMR7 532 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 SUSD1Q6UWL2 747 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 LINC00696Q6ZRV3 163 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 Q6ZS92 163 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 SDCCAG8Q86SQ7 713 aaPredicted RBP8.58□□□□□ -1.04
HLA-B-253ENST00000481849 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 TRIM42Q8IWZ5 723 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 SRRM1Q8IYB3 904 aaKnown RBP8.58□□□□□ -1.04
HLA-B-253ENST00000481849 OR2L3Q8NG85 312 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 DNAJB14Q8TBM8 379 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 DENND1AQ8TEH3 1009 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 MIEF2Q96C03 454 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 C5orf34Q96MH7 638 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 FOPNLQ96NB1 174 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 AGAP4Q96P64 663 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CRB3Q9BUF7 120 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 RAB11FIP5Q9BXF6 653 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 IL22Q9GZX6 179 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 ZNF160Q9HCG1 818 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 ZNF304Q9HCX3 659 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 LZTFL1Q9NQ48 299 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 EIF2B3Q9NR50 452 aaKnown RBP8.58□□□□□ -1.04
HLA-B-253ENST00000481849 IL1RAPL1Q9NZN1 696 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 BFARQ9NZS9 450 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 GALPQ9UBC7 116 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 CRYL1Q9Y2S2 319 aa8.58□□□□□ -1.04
HLA-B-253ENST00000481849 A0A1W2PPV9 198 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 HMX2A2RU54 273 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 KPNA5O15131 536 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 PAX4O43316 350 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 DDAH2O95865 285 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 LDLRP01130 860 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 FGGP02679 453 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 PCSK2P16519 638 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 FBLP22087 321 aaKnown RBP8.57□□□□□ -1.04
HLA-B-253ENST00000481849 RPS3P23396 243 aaKnown RBP eCLIP8.57□□□□□ -1.041e-10■■■■■ 30.2
HLA-B-253ENST00000481849 ARNTP27540 789 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CMPK1P30085 196 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CXCR5P32302 372 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 OCA2Q04671 838 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 KLC1Q07866 573 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 Q0VFX4 171 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 ACSBG2Q5FVE4 666 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 VWA2Q5GFL6 755 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CRB2Q5IJ48 1285 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.57□□□□□ -1.04
HLA-B-253ENST00000481849 YOD1Q5VVQ6 348 aaPredicted RBP8.57□□□□□ -1.04
HLA-B-253ENST00000481849 MRNIPQ6NTE8 343 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CASC4Q6P4E1 433 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 MAMDC2Q7Z304 686 aaPredicted RBP8.57□□□□□ -1.04
HLA-B-253ENST00000481849 LRRC6Q86X45 466 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 MPP5Q8N3R9 675 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 PPFIBP2Q8ND30 876 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CATSPER1Q8NEC5 780 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 OR11G2Q8NGC1 345 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 OR2A1Q8NGT9 310 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 STT3BQ8TCJ2 826 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 UBASH3BQ8TF42 649 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 UBE2Q2Q8WVN8 375 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 LPGAT1Q92604 370 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 PEX13Q92968 403 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 ZUFSPQ96AP4 578 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 FAM46AQ96IP4 442 aaKnown RBP8.57□□□□□ -1.04
HLA-B-253ENST00000481849 CABS1Q96KC9 395 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 ZNF285Q96NJ3 590 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 BIRC8Q96P09 236 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 DPH7Q9BTV6 452 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 LHPPQ9H008 270 aa8.57□□□□□ -1.04
HLA-B-253ENST00000481849 ADAM19Q9H013 955 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms