RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 SOWAHDA6NJG2 315 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 PRRG2O14669 202 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 ZNF189O75820 626 aaPredicted RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 TSPAN12O95859 305 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 CYC1P08574 325 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 CTNNA1P35221 906 aaKnown RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 MEP1AQ16819 746 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 RNFT1Q5M7Z0 435 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 TSTD2Q5T7W7 516 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 GALNTL5Q7Z4T8 443 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 LDB1Q86U70 411 aaPredicted RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 SHISA5Q8N114 240 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 EID3Q8N140 333 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 FAM71DQ8N9W8 422 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
RXRB-203ENST00000481441 OR52K1Q8NGK4 314 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 KCNK13Q9HB14 408 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 RIMKLBQ9ULI2 386 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 R3HDM2Q9Y2K5 976 aaKnown RBP16.38■□□□□ 0.21
RXRB-203ENST00000481441 PCDHA3Q9Y5H8 950 aa16.38■□□□□ 0.21
RXRB-203ENST00000481441 ABCA4P78363 2273 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 ZNF469Q96JG9 3925 aaPredicted RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 PRMT5O14744 637 aaPredicted RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 P2RX6O15547 441 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 PSMD3O43242 534 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 NRDCO43847 1150 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 NEURL1O76050 574 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 SP1P08047 785 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 ERGP11308 486 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 DNAJA1P31689 397 aaKnown RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 PPARGP37231 505 aaPredicted RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 CCNFP41002 786 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 FAM53BQ14153 422 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 P3H1Q32P28 736 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 FASTKD1Q53R41 847 aaKnown RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 ZNF425Q6IV72 752 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 RAD9BQ6WBX8 426 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 LINC00523Q86TU6 105 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 OR6P1Q8NGX9 317 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 GSDMBQ8TAX9 411 aa16.37■□□□□ 0.21
RXRB-203ENST00000481441 SKA2Q8WVK7 121 aaPredicted RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 MRPS30Q9NP92 439 aaKnown RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 C19orf25Q9UFG5 118 aaPredicted RBP16.37■□□□□ 0.21
RXRB-203ENST00000481441 AKAP6Q13023 2319 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 IST1P53990 364 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 TFF3Q07654 80 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 CDH17Q12864 832 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 PTRHD1Q6GMV3 140 aaKnown RBP16.36■□□□□ 0.21
RXRB-203ENST00000481441 SLC25A25Q6KCM7 469 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 AADACL2Q6P093 401 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 TGIF2LYQ8IUE0 185 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 MARVELD2Q8N4S9 558 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 TAB3Q8N5C8 712 aaPredicted RBP16.36■□□□□ 0.21
RXRB-203ENST00000481441 FAM98AQ8NCA5 519 aaKnown RBP16.36■□□□□ 0.21
RXRB-203ENST00000481441 M1APQ8TC57 530 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 NRGNQ92686 78 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 PANX3Q96QZ0 392 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 P2RY12Q9H244 342 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 CXXC4Q9H2H0 198 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 MARCH4Q9P2E8 410 aaPredicted RBP16.36■□□□□ 0.21
RXRB-203ENST00000481441 TFR2Q9UP52 801 aa16.36■□□□□ 0.21
RXRB-203ENST00000481441 A0A1B0GTL3 188 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 OR2W5A6NFC9 320 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 GABRR3A8MPY1 467 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 FOXO6A8MYZ6 492 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 TXNDC9O14530 226 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 SUN1O94901 812 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 TJP3O95049 919 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 ZNF24P17028 368 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 MAGEA1P43355 309 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 GDF10P55107 478 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 OC90Q02509 493 aaPredicted RBP16.35■□□□□ 0.21
RXRB-203ENST00000481441 RELAQ04206 551 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 EXT1Q16394 746 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 MINDY4Q4G0A6 757 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 SUSD1Q6UWL2 747 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 ANKRD37Q7Z713 158 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 DMRTC2Q8IXT2 367 aaPredicted RBP16.35■□□□□ 0.21
RXRB-203ENST00000481441 OR9A4Q8NGU2 314 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 LILRB4Q8NHJ6 448 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 MAGEC3Q8TD91 643 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 RERGQ96A58 199 aaPredicted RBP16.35■□□□□ 0.21
RXRB-203ENST00000481441 FOXC2Q99958 501 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 MMP25Q9NPA2 562 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 PCYOX1Q9UHG3 505 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 SCN3AQ9NY46 2000 aa16.35■□□□□ 0.21
RXRB-203ENST00000481441 DNHD1Q96M86 4753 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 H0YIG0 161 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 KPNA5O15131 536 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 FAM155BO75949 473 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 MATN4O95460 622 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 PKMP14618 531 aaKnown RBP16.34■□□□□ 0.21
RXRB-203ENST00000481441 EZRP15311 586 aaKnown RBP16.34■□□□□ 0.21
RXRB-203ENST00000481441 ADRA1DP25100 572 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 AVPR1BP47901 424 aa16.34■□□□□ 0.21
RXRB-203ENST00000481441 PRAMEP78395 509 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms