RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 HOXC13P31276 330 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 MAP2K2P36507 400 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 MAGEA11P43364 429 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 CRKLP46109 303 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 VAMP7P51809 220 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 MTCP1P56278 107 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 HERC3Q15034 1050 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 P2RY6Q15077 328 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 NONOQ15233 471 aaKnown RBP eCLIP3.44□□□□□ -1.86
CBX3-207ENST00000481300 ZNF876PQ49A33 203 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 LACTB2Q53H82 288 aaPredicted RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 HECTD3Q5T447 861 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 LCN1P1Q5VSP4 162 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 SHEQ5VZ18 495 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 FAM91A1Q658Y4 838 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 OR4A47Q6IF82 309 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 DCLRE1AQ6PJP8 1040 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 AMIGO1Q86WK6 493 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 DZIP1Q86YF9 867 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 FAM219AQ8IW50 185 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 ZNF843Q8N446 348 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 C9orf43Q8TAL5 461 aaPredicted RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 NR4A3Q92570 626 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 NSMAFQ92636 917 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 CENPTQ96BT3 561 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 SPATA33Q96N06 139 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 PGLYRP2Q96PD5 576 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 F2RL3Q96RI0 385 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 INPP5KQ9BT40 448 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 PITPNM3Q9BZ71 974 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 TLE6Q9H808 572 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 CHCHD3Q9NX63 227 aaKnown RBP3.44□□□□□ -1.86
CBX3-207ENST00000481300 GRID1Q9ULK0 1009 aa3.44□□□□□ -1.86
CBX3-207ENST00000481300 CEP170BQ9Y4F5 1589 aaPredicted RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 SETBP1Q9Y6X0 1596 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 NINLQ9Y2I6 1382 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 A0A087WV48 116 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 CASTOR2A6NHX0 329 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ERVV-2B6SEH9 535 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 GRID2O43424 1007 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ATP6AP2O75787 350 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 PGLSO95336 258 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 DARSP14868 501 aaKnown RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 EPORP19235 508 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 TNNT2P45379 298 aaPredicted RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 RGS7P49802 495 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 NAGLUP54802 743 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 POU5F1Q01860 360 aaKnown RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 ROR1Q01973 937 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 SQLEQ14534 574 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 FAM174BQ3ZCQ3 159 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 PDLIM3Q53GG5 364 aaPredicted RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 GFI1BQ5VTD9 330 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ZNF449Q6P9G9 518 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 C15orf39Q6ZRI6 1047 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 G2E3Q7L622 706 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 SPATA19Q7Z5L4 167 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 NRARPQ7Z6K4 114 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ZNF329Q86UD4 541 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 PIGZQ86VD9 579 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 OR8H3Q8N146 312 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 OR10Q1Q8NGQ4 319 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 HPSE2Q8WWQ2 592 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 ZNF501Q96CX3 271 aaPredicted RBP3.43□□□□□ -1.86
CBX3-207ENST00000481300 PGM2Q96G03 612 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ERO1AQ96HE7 468 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 CCDC114Q96M63 670 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 DUX3Q96PT4 197 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 FSD1Q9BTV5 496 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 MRGBPQ9NV56 204 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 GTF3C4Q9UKN8 822 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 CHKBQ9Y259 395 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 TRPM1Q7Z4N2 1603 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 ASXL1Q8IXJ9 1541 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 DLC1Q96QB1 1528 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 PTCH1Q13635 1447 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 MROH2AA6NES4 1674 aa3.43□□□□□ -1.86
CBX3-207ENST00000481300 TMEM94Q12767 1356 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 ANKRD36BQ8N2N9 1353 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 NPC1L1Q9UHC9 1359 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 PRR23AA6NEV1 266 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 HHLA1C9JL84 531 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 O00370 1275 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 CDC123O75794 336 aaPredicted RBP3.42□□□□□ -1.86
CBX3-207ENST00000481300 DDHD2O94830 711 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 GAS8-AS1O95177 125 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 CD48P09326 243 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 FAM58BPP0C7Q3 252 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 PATE4P0C8F1 98 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 STAG3L1P0CL83 205 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 SPP1P10451 314 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 GLULP15104 373 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 TCF4P15884 667 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 ADRA2CP18825 462 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 LHCGRP22888 699 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 ALDH4A1P30038 563 aa3.42□□□□□ -1.86
CBX3-207ENST00000481300 PPP2R1AP30153 589 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms