RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ANP32BQ92688 251 aaKnown RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 PRAP1Q96NZ9 151 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 LMF1Q96S06 567 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 NAP1L3Q99457 506 aaPredicted RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 FAM167BQ9BTA0 163 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 MKKSQ9NPJ1 570 aaPredicted RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 IARS2Q9NSE4 1012 aaKnown RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 PLA2G3Q9NZ20 509 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 KLHL42Q9P2K6 505 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 TRMT6Q9UJA5 497 aaKnown RBP14.48□□□□□ -0.09
LIMS3-203ENST00000480744 COMMD10Q9Y6G5 202 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 UNC79Q9P2D8 2635 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 CROCCQ5TZA2 2017 aa14.48□□□□□ -0.09
LIMS3-203ENST00000480744 POLEQ07864 2286 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 DYTNA2CJ06 578 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 USP27XA6NNY8 438 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 GFYI3L273 518 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 WFS1O76024 890 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 CLDN1O95832 211 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 SERPINA7P05543 415 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 CELA2AP08217 269 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 SLC26A3P40879 764 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 SKIV2L2P42285 1042 aaKnown RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 AVPR1BP47901 424 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 CYP1B1Q16678 543 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 NDUFA9Q16795 377 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 HSP90AA5PQ58FG0 334 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 MFSD4BQ5TF39 518 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 ZNF787Q6DD87 383 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 CYHR1Q6ZMK1 362 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 ZC3H7AQ8IWR0 971 aaKnown RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 LRRC56Q8IYG6 542 aaPredicted RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 NAT8LQ8N9F0 302 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 FAR1Q8WVX9 515 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 ALKBH8Q96BT7 664 aaKnown RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 SIGLEC10Q96LC7 697 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 NDNQ99608 321 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 AARSD1Q9BTE6 412 aaKnown RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 CCDC177Q9NQR7 707 aaPredicted RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 RIC8BQ9NVN3 520 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 MKL2Q9ULH7 1088 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 OSGIN2Q9Y236 505 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 MRPS2Q9Y399 296 aaKnown RBP14.47□□□□□ -0.09
LIMS3-203ENST00000480744 NEU2Q9Y3R4 380 aa14.47□□□□□ -0.09
LIMS3-203ENST00000480744 NOTCH2Q04721 2471 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 IGHV1-45A0A0A0MS14 117 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 WIPF3A6NGB9 483 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 E2F3O00716 465 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 F10P00742 488 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 EDN3P14138 238 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 FDXRP22570 491 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 MAGEA3P43357 314 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 TBPL1P62380 186 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 PPP1R7Q15435 360 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 PPIL6Q8IXY8 311 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 OR9A4Q8NGU2 314 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 GRK7Q8WTQ7 553 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 TGIF2Q9GZN2 237 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 OLAHQ9NV23 265 aa14.46□□□□□ -0.09
LIMS3-203ENST00000480744 TRMT1Q9NXH9 659 aaKnown RBP14.46□□□□□ -0.09
LIMS3-203ENST00000480744 GOLGA6L10A0A0M3HER8 536 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 LRRTM2O43300 516 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 JRKO75564 520 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 BMP10O95393 424 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 PGAM1P18669 254 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 SOX11P35716 441 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 RGS4P49798 205 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 SNRPNP63162 240 aaKnown RBP14.45□□□□□ -0.1
LIMS3-203ENST00000480744 RELAQ04206 551 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 PTK6Q13882 451 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 FAM53BQ14153 422 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 PCOLCEQ15113 449 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 MINDY4Q4G0A6 757 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 UGT3A1Q6NUS8 523 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 MBOAT1Q6ZNC8 495 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 PALM2Q8IXS6 379 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 ARHGEF39Q8N4T4 335 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 BCORP1Q8N888 145 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 ZCCHC10Q8TBK6 192 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 MCOLN3Q8TDD5 553 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 EEF1AKMT1Q8WVE0 214 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 METTL21AQ8WXB1 218 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 PSMF1Q92530 271 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 OSBPL9Q96SU4 736 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 MACROD1Q9BQ69 325 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIMS3-203ENST00000480744 ATG10Q9H0Y0 220 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 TMEM184CQ9NVA4 438 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 ASIC3Q9UHC3 531 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 ADAMTS6Q9UKP5 1117 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 CENPEQ02224 2701 aa14.45□□□□□ -0.1
LIMS3-203ENST00000480744 TRAV17A0A0B4J275 112 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 EIF3FO00303 357 aaPredicted RBP14.44□□□□□ -0.1
LIMS3-203ENST00000480744 PCDH17O14917 1159 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 BANF1O75531 89 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 C8orf89P0DMQ9 161 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 ITGAMP11215 1152 aa14.44□□□□□ -0.1
LIMS3-203ENST00000480744 IL1RNP18510 177 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms