RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TWIST2Q8WVJ9 160 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 ATP6V1E2Q96A05 226 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 PTCD3Q96EY7 689 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 CHMP6Q96FZ7 201 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 C3orf30Q96M34 536 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TRAPPC9Q96Q05 1148 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 SLC29A3Q9BZD2 475 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 AICDAQ9GZX7 198 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 FAM107BQ9H098 131 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 SEMA6CQ9H3T2 930 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 LRRN3Q9H3W5 708 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 EHD1Q9H4M9 534 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 SYNDIG1Q9H7V2 258 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 EML4Q9HC35 981 aaKnown RBP8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 NPHS2Q9NP85 383 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 EPHA6Q9UF33 1036 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 PILRAQ9UKJ1 303 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 TRAF6Q9Y4K3 522 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 KLK4Q9Y5K2 254 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 DNAJC15Q9Y5T4 150 aa8.6□□□□□ -1.03
NUDCD3-208ENST00000480209 SLC9B1P1A6NJY1 282 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 C4orf51C9J302 202 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 D6RAR5 112 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 MANBAO00462 879 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 PIP5K1BO14986 540 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 P2RX6O15547 441 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 HYAL3O43820 417 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 UGDHO60701 494 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 ETHE1O95571 254 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 PDYNP01213 254 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 ENO1P06733 434 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 FGF4P08620 206 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 UROSP10746 265 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CDH3P22223 829 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 HMOX2P30519 316 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 HNF4AP41235 474 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 GABRA4P48169 554 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CCR8P51685 355 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 NEK2P51955 445 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 LIMK1P53667 647 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CYP4F2P78329 520 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SQSTM1Q13501 440 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 KCNAB1Q14722 419 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 ABRAXAS2Q15018 415 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 XKR7Q5GH72 579 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SNAP47Q5SQN1 464 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 LIPJQ5W064 366 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 KLHL35Q6PF15 583 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 FIGLAQ6QHK4 219 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 WDR74Q6RFH5 385 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 VN1R4Q7Z5H5 301 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SLITRK4Q8IW52 837 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 LAS2Q8IYD9 372 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 KIAA2013Q8IYS2 634 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 C19orf47Q8N9M1 422 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 DEFB124Q8NES8 71 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 OR7G3Q8NG95 312 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 PIWIL2Q8TC59 973 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 USP7Q93009 1102 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SLC22A18Q96BI1 424 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 AHCYL2Q96HN2 611 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 PPP1R36Q96LQ0 422 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 EBF4Q9BQW3 602 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 NUF2Q9BZD4 464 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 ILKAPQ9H0C8 392 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 EPB41L1Q9H4G0 881 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 TMEM184CQ9NVA4 438 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SEMA5BQ9P283 1151 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 STK38LQ9Y2H1 464 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CCL27Q9Y4X3 112 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 DMXL1Q9Y485 3027 aa8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 CNOT1A5YKK6 2376 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-208ENST00000480209 SCN2AQ99250 2005 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 NUP210LQ5VU65 1888 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 IGHV5-10-1A0A0J9YXX1 117 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 TRBC2A0A5B9 178 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 GMNCA6NCL1 334 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 MAGEB17A8MXT2 336 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 H0YIV9 168 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 AGRPO00253 132 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 SDHDO14521 159 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 GIPC1O14908 333 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 OR1F1O43749 312 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 FOXD2O60548 495 aaPredicted RBP8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 GFRA3O60609 400 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 CPNE6O95741 557 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 GP1BAP07359 652 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 LINC00032P0C843 101 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 THRAP10827 490 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 PCNAP12004 261 aa8.58□□□□□ -1.04
NUDCD3-208ENST00000480209 SCTRP47872 440 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms