RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SERPINB1P30740 379 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ETV4P43268 484 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 BDKRB1P46663 353 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 GCGRP47871 477 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ARFIP1P53367 373 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 GFERP55789 205 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 TBPL1P62380 186 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 CDC20Q12834 499 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ABRQ12979 859 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 IL11RAQ14626 422 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ZXDCQ2QGD7 858 aaPredicted RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 GGTA1PQ4G0N0 100 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 YOD1Q5VVQ6 348 aaPredicted RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 ICE2Q659A1 982 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 NAPRTQ6XQN6 538 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ZNF517Q6ZMY9 492 aaPredicted RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 FRA10AC1Q70Z53 315 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 RNF44Q7L0R7 432 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 PLD6Q8N2A8 252 aaKnown RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 ESX1Q8N693 406 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 OR2L3Q8NG85 312 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 OR6Y1Q8NGX8 325 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 SKA2Q8WVK7 121 aaPredicted RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 APOBEC4Q8WW27 367 aaKnown RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 NXNL1Q96CM4 212 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 TCTN2Q96GX1 697 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 AHCYL2Q96HN2 611 aaKnown RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 SMC6Q96SB8 1091 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 RUFY1Q96T51 708 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 TRMOQ9BU70 441 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 GPN2Q9H9Y4 310 aaPredicted RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 PELI2Q9HAT8 420 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 TMBIM4Q9HC24 238 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 MLXIPLQ9NP71 852 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 HRASLS2Q9NWW9 162 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 ACTR10Q9NZ32 417 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 XPR1Q9UBH6 696 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 IKZF3Q9UKT9 509 aa8.55□□□□□ -1.04
DDX56-211ENST00000479602 CFAP20Q9Y6A4 193 aaKnown RBP8.55□□□□□ -1.04
DDX56-211ENST00000479602 HIVEP3Q5T1R4 2406 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 UQCRHLA0A096LP55 91 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 HMGB1P1B2RPK0 211 aaPredicted RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 H3BMH7 237 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 K7EPI3 171 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 DYNC1I1O14576 645 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 COPEO14579 308 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 BIRC5O15392 142 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 KIF1CO43896 1103 aaKnown RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 KATNA1O75449 491 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ZWINTO95229 277 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ONECUT2O95948 504 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 UQCRHP07919 91 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 FURINP09958 794 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 UGT2B7P16662 529 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ATP5F1P24539 256 aaPredicted RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 GABRA4P48169 554 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 KCNC1P48547 511 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 SH3BP2P78314 561 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 HSD11B2P80365 405 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 IRF9Q00978 393 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ASPHQ12797 758 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 UBAP2LQ14157 1087 aaKnown RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 IGFBP7Q16270 282 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 CCSMST1Q4G0I0 132 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
DDX56-211ENST00000479602 CEP85LQ5SZL2 805 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 PRAMEF13Q5VWM6 474 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 TCTN3Q6NUS6 607 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 FAM129CQ86XR2 697 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 PTRH1Q86Y79 214 aaKnown RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 OR2W6PQ8NHA6 318 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 UHMK1Q8TAS1 419 aaKnown RBP8.54□□□□□ -1.04
DDX56-211ENST00000479602 RAB3IL1Q8TBN0 382 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 MIB2Q96AX9 1013 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 FAM136AQ96C01 138 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 LRFN5Q96NI6 719 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 TRAPPC9Q96Q05 1148 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 TMEM79Q9BSE2 394 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 NTMT1Q9BV86 223 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 CD244Q9BZW8 370 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ALG9Q9H6U8 611 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 PCMTD2Q9NV79 361 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 TMEM184CQ9NVA4 438 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 PSD3Q9NYI0 1048 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 FAM8A1Q9UBU6 413 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 EMCNQ9ULC0 261 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 SNX7Q9UNH6 387 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 KCNE2Q9Y6J6 123 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 MED13Q9UHV7 2174 aa8.54□□□□□ -1.04
DDX56-211ENST00000479602 ANKRD12Q6UB98 2062 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 SPTBP11277 2137 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 A0A1W2PPM1 405 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 FITM1A5D6W6 292 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 OR6C74A6NCV1 312 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 A8MT66 165 aa8.53□□□□□ -1.04
DDX56-211ENST00000479602 NPIPB8E9PQR5 432 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms