RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 THUMPD1Q9NXG2 353 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TAS2R16Q9NYV7 291 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 SRRDQ9UH36 339 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ANGPTL3Q9Y5C1 460 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 M0R129 80 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 MANBAO00462 879 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ERN1O75460 977 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 SLC25A14O95258 325 aaPredicted RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 CCNDBP1O95273 360 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 KRT75O95678 551 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ESR1P03372 595 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 FABP3P05413 133 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 CXCR2P25025 360 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 UGT2B10P36537 528 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 CLCN4P51793 760 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 TUBA1BP68363 451 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 TUBA1AQ71U36 451 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 TRIM46Q7Z4K8 759 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ALG14Q96F25 216 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 CHCHD6Q9BRQ6 235 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ASB8Q9H765 288 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ERVK13-1Q9NX77 482 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 SAMD4AQ9UPU9 718 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 FKBP9O95302 570 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 GLUD1P00367 558 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 S100A3P33764 101 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 RPS14P62263 151 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ABHD18Q0P651 414 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 DOC2BQ14184 412 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 LRRC73Q5JTD7 316 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 OR4F3Q6IEY1 312 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 KIAA1841Q6NSI8 718 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 TMEM132CQ8N3T6 1108 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 CWH43Q9H720 699 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ELAC1Q9H777 363 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 MOV10Q9HCE1 1003 aaKnown RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 ZNF334Q9HCZ1 680 aaPredicted RBP12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 GPR83Q9NYM4 423 aa12.89□□□□□ -0.35
PDZRN3-208ENST00000479530 WNT9AO14904 365 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 IDH3BO43837 385 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 BNIP3LO60238 219 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 GREM1O60565 184 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 MFN2O95140 757 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 SEMG1P04279 462 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 INHAP05111 366 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 HMGCLP35914 325 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CACNG1Q06432 222 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 AGAP6Q5VW22 663 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CHST9Q7L1S5 443 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 IPCEF1Q8WWN9 437 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CLIP3Q96DZ5 547 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 AGAP4Q96P64 663 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 NXF2Q9GZY0 626 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 ANKHQ9HCJ1 492 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 EHD3Q9NZN3 535 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 SLC6A14Q9UN76 642 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 H7C0S8 307 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 AGRPO00253 132 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 SLC28A1O00337 649 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 RFXANKO14593 260 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CTDSP2O14595 271 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PQBP1O60828 265 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PDYNP01213 254 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PTHP01270 115 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 STSP08842 583 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 HSMCR30P0CW71 290 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 COL6A1P12109 1028 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 HNF1BP35680 557 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 TAF12Q16514 161 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 ZXDCQ2QGD7 858 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 CYP4Z2PQ8N1L4 340 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 PAF1Q8N7H5 531 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 AMER2Q8N7J2 671 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 RAET1EQ8TD07 263 aa12.88□□□□□ -0.35
PDZRN3-208ENST00000479530 GGHQ92820 318 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms