RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LRWD1Q9UFC0 647 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 CPSF3Q9UKF6 684 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 GAB2Q9UQC2 676 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 POMT1Q9Y6A1 747 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 DUOX1Q9NRD9 1551 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SCN9AQ15858 1988 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 RNF123Q5XPI4 1314 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 A0A1W2PPI3 338 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ARHGEF37A1IGU5 675 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM172BPA6NC97 362 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ENO4A6NNW6 628 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ERI2A8K979 691 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 P2RY10O00398 339 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 FGF17O60258 216 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 BAG4O95429 457 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 IGHV4-39P01824 125 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CSN3P07498 182 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZFYP08048 801 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 HOXB7P09629 217 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CFC1P0CG37 223 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CETPP11597 493 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CBLP22681 906 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ANOS1P23352 680 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 PTPN3P26045 913 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 IL15P40933 162 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TNNT3P45378 269 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TAF6P49848 677 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ATP12AP54707 1039 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TPD52P55327 224 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ITGA7Q13683 1181 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 KIR2DS3Q14952 304 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 WDR43Q15061 677 aaKnown RBP eCLIP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TWISTNBQ3B726 338 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 ASPRV1Q53RT3 343 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 SYT14P1Q58G82 188 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 STXBP5Q5T5C0 1151 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 IRAK1BP1Q5VVH5 260 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 MOXD1Q6UVY6 613 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 MSANTD1Q6ZTZ1 278 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 MARK2Q7KZI7 788 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC26A9Q7LBE3 791 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TMPRSS11BQ86T26 416 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM114A1Q8IWE2 563 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 TRIML1Q8N9V2 468 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 CTCFLQ8NI51 663 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 OCC1Q8TAD7 63 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 SNED1Q8TER0 1413 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 OTUB1Q96FW1 271 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 MLPHQ9BV36 600 aaPredicted RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 APOBEC3GQ9HC16 384 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 XAB2Q9HCS7 855 aaKnown RBP3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 SERINC1Q9NRX5 453 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 B3GAT1Q9P2W7 334 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 DNAJB9Q9UBS3 223 aa3.74□□□□□ -1.81
CDC42BPA-212ENST00000478573 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CTSVO60911 334 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC22A3O75751 556 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 APOHP02749 345 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 GBAP04062 536 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 INHBAP08476 426 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 KRT19P08727 400 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 SAGP10523 405 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 ACP2P11117 423 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 PDGFRAP16234 1089 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 EPCAMP16422 314 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CKMT2P17540 419 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 ATP5DP30049 168 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 PTGER4P35408 488 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 TCF7P36402 384 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 HOXA1P49639 335 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 THOP1P52888 689 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 RPS18P62269 152 aaKnown RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 TUBB4BP68371 445 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CUL3Q13618 768 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 TAF7Q15545 349 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 UGCGQ16739 394 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM174BQ3ZCQ3 159 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 ACCSLQ4AC99 568 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZRANB3Q5FWF4 1079 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM91A1Q658Y4 838 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 MCM10Q7L590 875 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 NUDT13Q86X67 352 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 COMMD2Q86X83 199 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CRYBG2Q8N1P7 616 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 ARHGAP24Q8N264 748 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 OR13A1Q8NGR1 328 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 FGFBP3Q8TAT2 258 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 GDAP1Q8TB36 358 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CCDC107Q8WV48 283 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 SYN2Q92777 582 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 SCRN2Q96FV2 425 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 INPP5KQ9BT40 448 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 POLR3CQ9BUI4 534 aaPredicted RBP3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 C2orf40Q9H1Z8 148 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 FN3KQ9H479 309 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 CDH20Q9HBT6 801 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 TBC1D7Q9P0N9 293 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 POLLQ9UGP5 575 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms