RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CCDC115Q96NT0 180 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CGREF1Q99674 301 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 EGFL8Q99944 293 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SH3GL1Q99961 368 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CLSTN3Q9BQT9 956 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 NTMT1Q9BV86 223 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 VN1R3Q9BXE9 311 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 UGT2B28Q9BY64 529 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CD244Q9BZW8 370 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CIPCQ9C0C6 399 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 WNT10AQ9GZT5 417 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 RNF38Q9H0F5 515 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ATP13A3Q9H7F0 1226 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 IPPKQ9H8X2 491 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TLR9Q9NR96 1032 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 INTS7Q9NVH2 962 aaKnown RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SMOXQ9NWM0 555 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 KCTD5Q9NXV2 234 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 SMPD3Q9NY59 655 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 PKD2L2Q9NZM6 624 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ATXN10Q9UBB4 475 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OPTCQ9UBM4 332 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF639Q9UID6 485 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 DUSP13Q9UII6 198 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CRLS1Q9UJA2 301 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 OAZ3Q9UMX2 235 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 POLR3HQ9Y535 204 aaPredicted RBP4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ASB1Q9Y576 335 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 FADS3Q9Y5Q0 445 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 ADAMTS20P59510 1910 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 USP24Q9UPU5 2620 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 TECTAO75443 2155 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CEP250Q9BV73 2442 aa4.81□□□□□ -1.64
SF3B6-202ENST00000478050 CHD9Q3L8U1 2897 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PTPRSQ13332 1948 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KIF26AQ9ULI4 1882 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 C1orf232A0A0U1RR37 186 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 A0A1W2PQ67 120 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 FAM149AA5PLN7 773 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 C2orf78A6NCI8 922 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM43BA6NCK2 446 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 AGAP14A8MT82 685 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 IQCF5A8MTL0 148 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 H3BSA7 217 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MANBAO00462 879 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GAPDHSO14556 408 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRRG1O14668 218 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 EI24O14681 340 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GSTA4O15217 222 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KATNA1O75449 491 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TRMUO75648 421 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRSS23O95084 383 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SCELO95171 688 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM16O95361 564 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRAMEF12O95522 483 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KRT6AP02538 564 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KRT6BP04259 564 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TP53P04637 393 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 IL6P05231 212 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 URODP06132 367 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ANXA5P08758 320 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CNPP09543 421 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ALPIP09923 528 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZGLP1P0C6A0 271 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MPC1LP0DKB6 136 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MTHFD1P11586 935 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRPS2P11908 318 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MYCLP1P12525 358 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SLC2A4P14672 509 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 IL9P15248 144 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NCK1P16333 377 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 BPIP17213 487 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PFKLP17858 780 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ITGB6P18564 788 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 UGT1A6P19224 532 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GGT1P19440 569 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SERPINA4P29622 427 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 HNF1BP35680 557 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NBL1P41271 181 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NSG1P42857 185 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GNPDA1P46926 289 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KRT6CP48668 564 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 HSPA7P48741 367 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 HNRNPFP52597 415 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NUP107P57740 925 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 OR4D2P58180 307 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SNRPD1P62314 119 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 RPL38P63173 70 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ADARB1P78563 741 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CREMQ03060 361 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 EPS8Q12929 822 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PPIGQ13427 754 aaKnown RBP eCLIP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NFATC2Q13469 925 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 DAG1Q14118 895 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CBX2Q14781 532 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ABRAXAS2Q15018 415 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 KIAA0040Q15053 153 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CHRNA6Q15825 494 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms