RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TRIM14Q14142 442 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 FAM53BQ14153 422 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 EXT1Q16394 746 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 RNFT1Q5M7Z0 435 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 C11orf63Q6NUN7 778 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 LGI4Q8N135 537 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 RERGQ96A58 199 aaPredicted RBP19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 CYTH2Q99418 400 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 OLFM1Q99784 485 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 OSBPL8Q9BZF1 889 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 SLC2A6Q9UGQ3 507 aa19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 NSD1Q96L73 2696 aaPredicted RBP19.1■□□□□ 0.65
PDLIM1-202ENST00000477757 NKX2-6A6NCS4 301 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 TMEM200CA6NKL6 621 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 TXNDC9O14530 226 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 TOXO94900 526 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 ERGP11308 486 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 EZRP15311 586 aaKnown RBP19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 PTGER1P34995 402 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 OC90Q02509 493 aaPredicted RBP19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 ACVR1Q04771 509 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 P3H1Q32P28 736 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 MINDY4Q4G0A6 757 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 ZNF425Q6IV72 752 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 SLC25A25Q6KCM7 469 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 TAB3Q8N5C8 712 aaPredicted RBP19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 SLC5A8Q8N695 610 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 OR4L1Q8NH43 312 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 LILRB4Q8NHJ6 448 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 FAM57AQ8TBR7 257 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 M1APQ8TC57 530 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 SKA2Q8WVK7 121 aaPredicted RBP19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 MRFAP1L1Q96HT8 127 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 MRPS30Q9NP92 439 aaKnown RBP19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 MMP25Q9NPA2 562 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 ABHD10Q9NUJ1 306 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 GNPTGQ9UJJ9 305 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 RIMKLBQ9ULI2 386 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 ABCA4P78363 2273 aa19.09■□□□□ 0.65
PDLIM1-202ENST00000477757 FAM90A27PA6NNH2 459 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 PRMT5O14744 637 aaPredicted RBP19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 P2RX6O15547 441 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 NME2P1O60361 137 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 SLC25A12O75746 678 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 PKMP14618 531 aaKnown RBP19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 NME2P22392 152 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 PPARGP37231 505 aaPredicted RBP19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 AGTR2P50052 363 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 AARS2Q5JTZ9 985 aaKnown RBP19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 TSTD2Q5T7W7 516 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 MFSD4BQ5TF39 518 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 CES4AQ5XG92 561 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 CEP128Q6ZU80 1094 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 ANKRD37Q7Z713 158 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 CD163Q86VB7 1156 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 MAGEC3Q8TD91 643 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 FOPNLQ96NB1 174 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 DLL4Q9NR61 685 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 LRFN1Q9P244 771 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 RNF6Q9Y252 685 aa19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 R3HDM2Q9Y2K5 976 aaKnown RBP19.08■□□□□ 0.64
PDLIM1-202ENST00000477757 H0YIG0 161 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 HOXD4P09016 255 aaPredicted RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 CTNNA1P35221 906 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 PTGS2P35354 604 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 AVPR1BP47901 424 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 SNRPNP63162 240 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 RELAQ04206 551 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 PTK6Q13882 451 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 FASTKD1Q53R41 847 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 LINC00523Q86TU6 105 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 CPSF7Q8N684 471 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 OR52K1Q8NGK4 314 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 OR6P1Q8NGX9 317 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 PANX3Q96QZ0 392 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 SLC24A3Q9HC58 644 aa19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 CCM2LQ9NUG4 571 aaPredicted RBP19.07■□□□□ 0.64
PDLIM1-202ENST00000477757 SOWAHDA6NJG2 315 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 CDK2AP1O14519 115 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 KPNA5O15131 536 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 PSMD3O43242 534 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 ZWINTO95229 277 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 TPOP07202 933 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 RPA3P35244 121 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 CDH17Q12864 832 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 FOXD4Q12950 439 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 MAPKAPK3Q16644 382 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 NDUFA9Q16795 377 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 PTRHD1Q6GMV3 140 aaKnown RBP19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 TMEM211Q6ICI0 200 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 SUSD1Q6UWL2 747 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 OTOAQ7RTW8 1153 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 FAM71DQ8N9W8 422 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 OR9A4Q8NGU2 314 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 SMPDL3AQ92484 453 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 ZNF778Q96MU6 729 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 UCK2Q9BZX2 261 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 GSX1Q9H4S2 264 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 KCNJ16Q9NPI9 418 aa19.06■□□□□ 0.64
PDLIM1-202ENST00000477757 UTP6Q9NYH9 597 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms