RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TBK1Q9UHD2 729 aa16.87■□□□□ 0.29
PTPN7-209ENST00000477554 SNX7Q9UNH6 387 aa16.87■□□□□ 0.29
PTPN7-209ENST00000477554 ARGFXA6NJG6 315 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 H7BY64 318 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 AGPSO00116 658 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 WISP3O95389 354 aaPredicted RBP16.86■□□□□ 0.29
PTPN7-209ENST00000477554 GUCA1CO95843 209 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 ZNF37AP17032 561 aaPredicted RBP16.86■□□□□ 0.29
PTPN7-209ENST00000477554 CMPK1P30085 196 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 NAE1Q13564 534 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 NKAIN1Q4KMZ8 207 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 MROH9Q5TGP6 573 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 UGT3A1Q6NUS8 523 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 TLDC1Q6P9B6 456 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 AGTRAPQ6RW13 159 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 SYVN1Q86TM6 617 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 PGM2Q96G03 612 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 ABHD17AQ96GS6 310 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 PRAP1Q96NZ9 151 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 OR4K3Q96R72 315 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 GPR22Q99680 433 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 INTS7Q9NVH2 962 aaKnown RBP16.86■□□□□ 0.29
PTPN7-209ENST00000477554 CTNNAL1Q9UBT7 734 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 CTSFQ9UBX1 484 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 MRPS2Q9Y399 296 aaKnown RBP16.86■□□□□ 0.29
PTPN7-209ENST00000477554 AP1M2Q9Y6Q5 423 aa16.86■□□□□ 0.29
PTPN7-209ENST00000477554 FEZF1A0PJY2 475 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 FITM1A5D6W6 292 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 EIF3FO00303 357 aaPredicted RBP16.85■□□□□ 0.29
PTPN7-209ENST00000477554 PHGDHO43175 533 aaKnown RBP16.85■□□□□ 0.29
PTPN7-209ENST00000477554 C8GP07360 202 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 UMODP07911 640 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 KRT15P19012 456 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 IL2P60568 153 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 DCDP81605 110 aaKnown RBP16.85■□□□□ 0.29
PTPN7-209ENST00000477554 MC1RQ01726 317 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 POU4F1Q01851 419 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 C19orf57Q0VDD7 668 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 PPP1R3AQ16821 1122 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 MRPL14Q6P1L8 145 aaKnown RBP16.85■□□□□ 0.29
PTPN7-209ENST00000477554 ARHGEF39Q8N4T4 335 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 APOBEC4Q8WW27 367 aaKnown RBP16.85■□□□□ 0.29
PTPN7-209ENST00000477554 CATSPER2Q96P56 530 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 OR2A5Q96R48 311 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 SH3GL2Q99962 352 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 ZFYVE21Q9BQ24 234 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 NDC1Q9BTX1 674 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 TMBIM4Q9HC24 238 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 TXLNGQ9NUQ3 528 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 TLK1Q9UKI8 766 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 POLHQ9Y253 713 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 MAN2B2Q9Y2E5 1009 aa16.85■□□□□ 0.29
PTPN7-209ENST00000477554 ALOX12BO75342 701 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 RGS4P49798 205 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 SLC12A2P55011 1212 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 MEF2AQ02078 507 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-209ENST00000477554 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 PRTGQ2VWP7 1150 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 ZC3H12BQ5HYM0 836 aaKnown RBP16.84■□□□□ 0.29
PTPN7-209ENST00000477554 THEMIS2Q5TEJ8 643 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 PRAMEF13Q5VWM6 474 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 ADCK2Q7Z695 626 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 MCOLN3Q8TDD5 553 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 CCDC138Q96M89 665 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 SPNS1Q9H2V7 528 aa16.84■□□□□ 0.29
PTPN7-209ENST00000477554 IFT80Q9P2H3 777 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-209ENST00000477554 RUVBL1Q9Y265 456 aaKnown RBP16.84■□□□□ 0.29
PTPN7-209ENST00000477554 PTRH2Q9Y3E5 179 aaKnown RBP16.84■□□□□ 0.29
PTPN7-209ENST00000477554 TENM4Q6N022 2769 aa16.83■□□□□ 0.29
PTPN7-209ENST00000477554 A0A1B0GX78 115 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 HYKKA2RU49 373 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 HMX2A2RU54 273 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 TRIM49D1C9J1S8 452 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 DSCR3O14972 297 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
PTPN7-209ENST00000477554 HBQ1P09105 142 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 CDH1P12830 882 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 AGXTP21549 392 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 OTX2P32243 289 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SERPINB8P50452 374 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SP140Q13342 867 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 BMPR2Q13873 1038 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 USP10Q14694 798 aaKnown RBP16.83■□□□□ 0.28
PTPN7-209ENST00000477554 FBXO48Q5FWF7 155 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 TIFABQ6ZNK6 161 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 VN1R4Q7Z5H5 301 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 PROKR1Q8TCW9 393 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 TSPAN17Q96FV3 270 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SGPP1Q9BX95 441 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 TRIM4Q9C037 500 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SLC25A18Q9H1K4 315 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 CCDC177Q9NQR7 707 aaPredicted RBP16.83■□□□□ 0.28
PTPN7-209ENST00000477554 ENAMQ9NRM1 1142 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 ARL15Q9NXU5 204 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SENP1Q9P0U3 644 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 SRPK3Q9UPE1 567 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 TP53TG5Q9Y2B4 290 aa16.83■□□□□ 0.28
PTPN7-209ENST00000477554 RELNP78509 3460 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms