RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 HAT1O14929 419 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 TTI1O43156 1089 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 C8orf89P0DMQ9 161 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 HADHBP55084 474 aaKnown RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CASP6P55212 293 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 ACVR1Q04771 509 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 SNTB1Q13884 538 aaKnown RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 LONRF1Q17RB8 773 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 PARP6Q2NL67 630 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 SKOR2Q2VWA4 1001 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 EMC4Q5J8M3 183 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CTSL3PQ5NE16 218 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 PLAG1Q6DJT9 500 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 ZNF425Q6IV72 752 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CPEB2Q7Z5Q1 589 aaKnown RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 ANKRD37Q7Z713 158 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CCDC71Q8IV32 467 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 PPFIBP2Q8ND30 876 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 SUN3Q8TAQ9 357 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 PHF10Q8WUB8 498 aaKnown RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 FAM136AQ96C01 138 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 VPS50Q96JG6 964 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 VKORC1Q9BQB6 163 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 TUBB6Q9BUF5 446 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CARD6Q9BX69 1037 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 OSBPL8Q9BZF1 889 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 P2RY12Q9H244 342 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 GPAMQ9HCL2 828 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 MKKSQ9NPJ1 570 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 CCM2LQ9NUG4 571 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 C14orf105Q9NVL8 296 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 HCN3Q9P1Z3 774 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 RPH3AQ9Y2J0 694 aaPredicted RBP9.2□□□□□ -0.94
COL4A5-204ENST00000477429 SCN2AQ99250 2005 aa9.2□□□□□ -0.94
COL4A5-204ENST00000477429 A0A1B0GTH9 108 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 SYCE3A1L190 88 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 GABRR3A8MPY1 467 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 ARHGEF33A8MVX0 844 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 QSOX1O00391 747 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 SP1P08047 785 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 ERGP11308 486 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 ABOP16442 354 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 KLK2P20151 261 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 CTNNA1P35221 906 aaKnown RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 EMP3P54852 163 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 DLX5P56178 289 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 PLOD1Q02809 727 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 LTBQ06643 244 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 FOXD4Q12950 439 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 KRTCAP3Q53RY4 240 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 TSTD2Q5T7W7 516 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 CCDC181Q5TID7 509 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 VN1R4Q7Z5H5 301 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 PDSS2Q86YH6 399 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 DMRTC2Q8IXT2 367 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 CA5BP1Q8WTZ4 195 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 ASZ1Q8WWH4 475 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 TSLPQ969D9 159 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 RAD51AP1Q96B01 352 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 IQCDQ96DY2 449 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 CCDC42Q96M95 316 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 LRRC40Q9H9A6 602 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 KCNK13Q9HB14 408 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 ZNF358Q9NW07 568 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 PCYOX1Q9UHG3 505 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 FEZ2Q9UHY8 353 aaPredicted RBP9.19□□□□□ -0.94
COL4A5-204ENST00000477429 PCDHA3Q9Y5H8 950 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 DUSP10Q9Y6W6 482 aa9.19□□□□□ -0.94
COL4A5-204ENST00000477429 SGK494L7N484 410 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 KDM1AO60341 852 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 MFAP3LO75121 409 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 FKBP9O95302 570 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 APOA4P06727 396 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 ERVK-10P10266 1014 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 IL1RNP18510 177 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 MSX1P28360 303 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 EEF1DP29692 281 aaKnown RBP9.18□□□□□ -0.94
COL4A5-204ENST00000477429 PTPN7P35236 360 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 GBX1Q14549 363 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 CMPK2Q5EBM0 449 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 SLC25A25Q6KCM7 469 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 AFTPHQ6ULP2 937 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 TMEM200AQ86VY9 491 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 LRRC56Q8IYG6 542 aaPredicted RBP9.18□□□□□ -0.94
COL4A5-204ENST00000477429 OR6P1Q8NGX9 317 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 OR4L1Q8NH43 312 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 MVB12AQ96EY5 273 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 ZNF354BQ96LW1 612 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 PKP4Q99569 1192 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 UTP23Q9BRU9 249 aaKnown RBP9.18□□□□□ -0.94
COL4A5-204ENST00000477429 DRC3Q9H069 523 aa9.18□□□□□ -0.94
COL4A5-204ENST00000477429 CDCP1Q9H5V8 836 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms