RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CAMK1DQ8IU85 385 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CD302Q8IX05 232 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 AQP12AQ8IXF9 295 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF595Q8IYB9 648 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ADGRF3Q8IZF5 1079 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 C1orf87Q8N0U7 546 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FAM109AQ8N4B1 249 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CSGALNACT2Q8N6G5 542 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TTC9BQ8N6N2 239 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 GPR161Q8N6U8 529 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DNAAF3Q8N9W5 541 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 KYQ8NBH2 561 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MINDY2Q8NBR6 621 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PAPD5Q8NDF8 572 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TRPV1Q8NER1 839 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 OR9K2Q8NGE7 335 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 RAB3IL1Q8TBN0 382 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TRMT10AQ8TBZ6 339 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PAQR8Q8TEZ7 354 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 GIPC3Q8TF64 312 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 WIPF2Q8TF74 440 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CHPT1Q8WUD6 406 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ZCCHC14Q8WYQ9 949 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SNX19Q92543 992 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LARP4BQ92615 738 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DVL3Q92997 716 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 IGSF8Q969P0 613 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CIDECQ96AQ7 238 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 OTULINQ96BN8 352 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MOB3AQ96BX8 217 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CTHRC1Q96CG8 243 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 HAVCR1Q96D42 359 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 OTUB1Q96FW1 271 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ZC3HAV1LQ96H79 300 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FCRL4Q96PJ5 515 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LRRC37BQ96QE4 947 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FRG2BQ96QU4 278 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CPNE1Q99829 537 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FAM110AQ9BQ89 295 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 UQCC2Q9BRT2 126 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ALG12Q9BV10 488 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NUF2Q9BZD4 464 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NSRP1Q9H0G5 558 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CUEDC2Q9H467 287 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 BCAS3Q9H6U6 928 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MEAF6Q9HAF1 191 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SLC28A3Q9HAS3 691 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 HHATLQ9HCP6 504 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ABHD10Q9NUJ1 306 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NUDT15Q9NV35 164 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ARL15Q9NXU5 204 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 VSX1Q9NZR4 365 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PTGFRNQ9P2B2 879 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NLKQ9UBE8 527 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CTNNAL1Q9UBT7 734 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DBF4Q9UBU7 674 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CRLS1Q9UJA2 301 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PLCL2Q9UPR0 1127 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ICKQ9UPZ9 632 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MRPS33Q9Y291 106 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NME7Q9Y5B8 376 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SLCO1B1Q9Y6L6 691 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 U3KQE9 123 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CDC42BPAQ5VT25 1732 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MYO15AQ9UKN7 3530 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DUOX2Q9NRD8 1548 aa2.78□□□□□ -1.97
HMGN4-202ENST00000477243 BCL9O00512 1426 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 NRAPQ86VF7 1730 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SF3B1O75533 1304 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 A0A0J9YYE9 177 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 A0A1W2PPQ1 181 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 A0A1W2PS29 197 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TMEM129A0AVI4 362 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 UBE2QL1A1L167 161 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 HEATR9A2RTY3 570 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MYADML2A6NDP7 307 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 BTBD17A6NE02 478 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TUBAL3A6NHL2 446 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TCP11X1B4DZS4 312 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 F8VZ95 297 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PSMD11O00231 422 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TRDMT1O14717 391 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MAP2K7O14733 419 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LSM1O15116 133 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 AP5Z1O43299 807 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SPRY2O43597 315 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 KRT86O43790 486 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 AKAP8O43823 692 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SSX4O60224 188 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LCMT2O60294 686 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ECE2O60344 883 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 DNAJB6O75190 326 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CDH16O75309 829 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 NIPSNAP2O75323 286 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CREG1O75629 220 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CNTN5O94779 1100 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 DDNO94850 711 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms