RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 FLRT2O43155 660 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 MBTPS2O43462 519 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 GPRIN2O60269 458 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 NCR1O76036 304 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 CALCBP10092 127 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 SAGP10523 405 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 EPB41P11171 864 aaKnown RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 FUT1P19526 365 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 CD22P20273 847 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 DDX6P26196 483 aaKnown RBP eCLIP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 SSTR4P31391 388 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 SOX2P48431 317 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 LHX1P48742 406 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 HMGCS2P54868 508 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 IRX3P78415 501 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 MVPQ14764 893 aaKnown RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 KPNB1Q14974 876 aaKnown RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 KCTD21Q4G0X4 260 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ARHGEF16Q5VV41 709 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ZDHHC20Q5W0Z9 365 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 PM20D1Q6GTS8 502 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 CES3Q6UWW8 571 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 POLNQ7Z5Q5 900 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 BCDIN3DQ7Z5W3 292 aaKnown RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 EGFL6Q8IUX8 553 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 LRRC56Q8IYG6 542 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 RASGEF1AQ8N9B8 481 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 OR6C4Q8NGE1 309 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 OR2T34Q8NGX1 318 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 OR10T2Q8NGX3 314 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ACTRT2Q8TDY3 377 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 SLCO4A1Q96BD0 722 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 TTC25Q96NG3 672 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 MYADMQ96S97 322 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 SPAG8Q99932 426 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 PIGQQ9BRB3 760 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 GATA5Q9BWX5 397 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 TMEM117Q9H0C3 514 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 CATSPERBQ9H7T0 1116 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ZNF304Q9HCX3 659 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 KCNMB3Q9NPA1 279 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ZCCHC3Q9NUD5 404 aaKnown RBP6.56□□□□□ -1.36
LRCH3-215ENST00000476664 TMEM184CQ9NVA4 438 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 RCOR1Q9UKL0 485 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 ANGPTL2Q9UKU9 493 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 GRIP1Q9Y3R0 1128 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 RFX7Q2KHR2 1363 aa6.56□□□□□ -1.36
LRCH3-215ENST00000476664 COL11A1P12107 1806 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 MACROD2A1Z1Q3 448 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 FAM90A10PA6NDY2 464 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SLC15A5A6NIM6 579 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 H0YIV9 168 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 NEMFO60524 1076 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ACSL3O95573 720 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ASGR1P07306 291 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 FURINP09958 794 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 OR2T7P0C7T2 308 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 DDX5P17844 614 aaKnown RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 CYP2F1P24903 491 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ITGA3P26006 1051 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 PTPN4P29074 926 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 PRKAR2BP31323 418 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ARHGAP25P42331 645 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 PTGER3P43115 390 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 MAGEB1P43366 347 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SLC9A3P48764 834 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ACLYP53396 1101 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 METAP1P53582 386 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 CCL23P55773 120 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 IRX4P78413 519 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SLC25A3Q00325 362 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 DMTNQ08495 405 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SNTB2Q13425 540 aaKnown RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SSPNQ14714 243 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 TPD52L1Q16890 204 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 APOBEC3HQ6NTF7 200 aaKnown RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 LRIG3Q6UXM1 1119 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 LRRC70Q7Z2Q7 622 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 CPEB3Q8NE35 698 aaKnown RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 STEAP2Q8NFT2 490 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 STAMBPL1Q96FJ0 436 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 TPD52L3Q96J77 140 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 EPSTI1Q96J88 318 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 OR6C1Q96RD1 312 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 PCDHB18PQ96TA0 734 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 THAP2Q9H0W7 228 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 TBC1D17Q9HA65 648 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 CRLF2Q9HC73 371 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 CPNE5Q9HCH3 593 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 MYNNQ9NPC7 610 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 GLRX2Q9NS18 164 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 ACSS1Q9NUB1 689 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-215ENST00000476664 SERTAD4Q9NUC0 356 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 RNF150Q9ULK6 438 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 PADI2Q9Y2J8 665 aa6.55□□□□□ -1.36
LRCH3-215ENST00000476664 NFE2L3Q9Y4A8 694 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms