RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 LRIG1Q96JA1 1093 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SORCS2Q96PQ0 1159 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NEDD4LQ96PU5 975 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM111AQ96PZ2 611 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CDC6Q99741 560 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNF559Q9BR84 538 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ARHGAP9Q9BRR9 750 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 LXNQ9BS40 222 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DGCR6LQ9BY27 220 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ANO3Q9BYT9 981 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DNTTIP1Q9H147 329 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MIXL1Q9H2W2 232 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NOL11Q9H8H0 719 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 MAGEF1Q9HAY2 307 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PCDH9Q9HC56 1237 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SARS2Q9NP81 518 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 MPP6Q9NZW5 540 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TMEM181Q9P2C4 612 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 OPTCQ9UBM4 332 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SEC14L4Q9UDX3 406 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PISDQ9UG56 409 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TBC1D24Q9ULP9 559 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 KCNH4Q9UQ05 1017 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CA5BQ9Y2D0 317 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PCDHA1Q9Y5I3 950 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NPFFR2Q9Y5X5 522 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FER1L6Q2WGJ9 1857 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 LAMB1P07942 1786 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NWD1Q149M9 1564 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NID2Q14112 1375 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NFASCO94856 1347 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM205AQ6ZU69 1335 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MAGEB6P1A0A0J9YX57 407 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM86C2PA6NEL3 165 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 F8VP50 259 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 KPNA3O00505 521 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 NFIBO00712 420 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CASC3O15234 703 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 PAPSS1O43252 624 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 TXNL1O43396 289 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SNNO75324 88 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 VPS4BO75351 444 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 H2AFYO75367 372 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 LRCH4O75427 683 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CREG1O75629 220 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PGLSO95336 258 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 STARD3NLO95772 234 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 OTCP00480 354 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PCCAP05165 728 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 KITP10721 976 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 POU3F2P20265 443 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 CPN2P22792 545 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 IGFBP5P24593 272 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MCM7P33993 719 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RYKP34925 604 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ADCYAP1R1P41586 468 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 OMPP47874 163 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RFX2P48378 723 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NUDT2P50583 147 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 STAT5BP51692 787 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 XKP51811 444 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NR0B1P51843 470 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 PRELPP51888 382 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NUDT6P53370 316 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NUTF2P61970 127 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 TAP2Q03519 686 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 EPS8Q12929 822 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CEACAM7Q14002 265 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PLCL1Q15111 1095 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SIX1Q15475 284 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNHIT3Q15649 155 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 CHRNA6Q15825 494 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NTRK3Q16288 839 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 AOC3Q16853 763 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 USP39Q53GS9 565 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 TEX44Q53QW1 395 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SGO1Q5FBB7 561 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SPANXN2Q5MJ10 180 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 JMJD6Q6NYC1 403 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 SHFQ7M4L6 423 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 IRF2BP2Q7Z5L9 587 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TGIF2LXQ8IUE1 241 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MCATQ8IVS2 390 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ZDHHC14Q8IZN3 488 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 OFCC1Q8IZS5 231 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RDH10Q8IZV5 341 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TMEM132CQ8N3T6 1108 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CBR4Q8N4T8 237 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNF561Q8N587 486 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ARRDC1Q8N5I2 433 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DNAJB8Q8NHS0 232 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PHOSPHO1Q8TCT1 267 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 BPIFB1Q8TDL5 484 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 UBASH3BQ8TF42 649 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 GLYATL2Q8WU03 294 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MZB1Q8WU39 189 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM216AQ8WUB2 273 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MAFIPQ8WZ33 124 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 EAF2Q96CJ1 260 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms