RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TSTQ16762 297 aaKnown RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 CCSMST1Q4G0I0 132 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 GPAT3Q53EU6 434 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 KIAA1161Q6NSJ0 714 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 BLOC1S3Q6QNY0 202 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 IQCHQ86VS3 1027 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 CHERPQ8IWX8 916 aaKnown RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 PRSS58Q8IYP2 241 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 C10orf53Q8N6V4 93 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 OR10G6Q8NH81 332 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 NFKBIDQ8NI38 313 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 FNDC8Q8TC99 324 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM125Q96AQ2 219 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 MYRFLQ96LU7 910 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 APOL4Q9BPW4 351 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 C2orf49Q9BVC5 232 aaPredicted RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 RIOK2Q9BVS4 552 aaKnown RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 OR51E2Q9H255 320 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 MEAF6Q9HAF1 191 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 KCNK12Q9HB15 430 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 CCM2LQ9NUG4 571 aaPredicted RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 THUMPD1Q9NXG2 353 aaKnown RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 BTBD3Q9Y2F9 522 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 LOXHD1Q8IVV2 1947 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FEZF1A0PJY2 475 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MAGEB17A8MXT2 336 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 INPPL1O15357 1258 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TOXO94900 526 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 C6orf47O95873 294 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 IGSF6O95976 241 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 C9P02748 559 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KLKB1P03952 638 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FABP3P05413 133 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 IGFBP1P08833 259 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 OR56A5P0C7T3 313 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KCNE1P15382 129 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TTKP33981 857 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 HNF1BP35680 557 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SOX9P48436 509 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PCDH1Q08174 1060 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CSTF3Q12996 717 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PON2Q15165 354 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ADRM1Q16186 407 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TIGD6Q17RP2 521 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 UGT3A2Q3SY77 523 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ARSIQ5FYB1 569 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PDZK1Q5T2W1 519 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CPTPQ5TA50 214 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KCTD11Q693B1 232 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PRMT9Q6P2P2 845 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TRIM40Q6P9F5 258 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM220Q6QAJ8 160 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FAM131AQ6UXB0 335 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CEP68Q76N32 757 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RNF44Q7L0R7 432 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 NPAS4Q8IUM7 802 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TIGD4Q8IY51 512 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TCAIMQ8N3R3 496 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM151AQ8N4L1 468 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 LINC01465Q8N7H1 131 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ABHD11Q8NFV4 315 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ZCCHC10Q8TBK6 192 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TFAP2CQ92754 450 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PPP3R2Q96LZ3 170 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CASD1Q96PB1 797 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ATAD3AQ9NVI7 634 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 GNPTGQ9UJJ9 305 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TMCC3Q9ULS5 477 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TLR6Q9Y2C9 796 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ICE1Q9Y2F5 2266 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ROS1P08922 2347 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FAM92AA1XBS5 289 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FUOMA2VDF0 154 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TBC1D3BA6NDS4 549 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF99A8MXY4 864 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TPD52L2O43399 206 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 BCHEP06276 602 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 HTR1BP28222 390 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CD70P32970 193 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SOX3P41225 446 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 AVPR1BP47901 424 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TUFMP49411 452 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 EPHB3P54753 998 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MANFP55145 182 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RPS13P62277 151 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MAP4K2Q12851 820 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 GPM6BQ13491 265 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 C6orf141Q5SZD1 244 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 NADSYN1Q6IA69 706 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CASP12Q6UXS9 341 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CLEC14AQ86T13 490 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 VRK3Q8IV63 474 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms