RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 IP6K3Q96PC2 410 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 TRIM54Q9BYV2 358 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 ZDHHC18Q9NUE0 388 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 P4HTMQ9NXG6 502 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 NOVA2Q9UNW9 492 aaKnown RBP20.15■□□□□ 0.82
LIME1-204ENST00000476183 MRPS2Q9Y399 296 aaKnown RBP20.15■□□□□ 0.82
LIME1-204ENST00000476183 PCDHGA9Q9Y5G4 932 aaKnown RBP20.15■□□□□ 0.82
LIME1-204ENST00000476183 MYO18BQ8IUG5 2567 aa20.15■□□□□ 0.82
LIME1-204ENST00000476183 FEZF1A0PJY2 475 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 A6NL46 340 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 FOXS1O43638 330 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 RRADP55042 308 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 POU4F1Q01851 419 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 GUCY2DQ02846 1103 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 ANKRD7Q92527 254 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 RBBP8Q99708 897 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 CPNE1Q99829 537 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 MACROD1Q9BQ69 325 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 NUDT9Q9BW91 350 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 EPN3Q9H201 632 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 POPDC3Q9HBV1 291 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 GPAMQ9HCL2 828 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 ANAPC2Q9UJX6 822 aa20.14■□□□□ 0.81
LIME1-204ENST00000476183 NUP210LQ5VU65 1888 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 KCNE1BA0A087WTH5 132 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 PABPN1LA6NDY0 278 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 FFAR3O14843 346 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 GPR42O15529 346 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 LCMT2O60294 686 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 FAM155BO75949 473 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 FBLP22087 321 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 MMP11P24347 488 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 GP5P40197 560 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 BCL6P41182 706 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 RPS15AP62244 130 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 KLRB1Q12918 225 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 TSNQ15631 228 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 KBTBD12Q3ZCT8 623 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 DCAF10Q5QP82 559 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 GARNL3Q5VVW2 1013 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 AMER3Q8N944 861 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 NOA1Q8NC60 698 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 STT3BQ8TCJ2 826 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 ATL1Q8WXF7 558 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 GPR22Q99680 433 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 MESP1Q9BRJ9 268 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 HAUS8Q9BT25 410 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 UNKQ9C0B0 810 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 NXT1Q9UKK6 140 aaKnown RBP20.13■□□□□ 0.81
LIME1-204ENST00000476183 HS3ST3B1Q9Y662 390 aa20.13■□□□□ 0.81
LIME1-204ENST00000476183 IGLV3-12A0A075B6K2 115 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 PEX12O00623 359 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 TXNDC9O14530 226 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 SOCS6O14544 535 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 PHGDHO43175 533 aaKnown RBP20.12■□□□□ 0.81
LIME1-204ENST00000476183 ZGLP1P0C6A0 271 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 CASRP41180 1078 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 PGDP52209 483 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 MEF2AQ02078 507 aaPredicted RBP20.12■□□□□ 0.81
LIME1-204ENST00000476183 TLE1Q04724 770 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 KLC1Q07866 573 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 RAPSNQ13702 412 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 DSG2Q14126 1118 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 USP10Q14694 798 aaKnown RBP20.12■□□□□ 0.81
LIME1-204ENST00000476183 VWA2Q5GFL6 755 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 CTAGE3PQ8IX95 158 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 PRSS58Q8IYP2 241 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 SPATA6LQ8N4H0 392 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 MMGT1Q8N4V1 131 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 ABHD11Q8NFV4 315 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 FBF1Q8TES7 1133 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 MVB12AQ96EY5 273 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 FER1L6-AS2Q96M78 137 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 TXNDC16Q9P2K2 825 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 ZNF282Q9UDV7 671 aaPredicted RBP20.12■□□□□ 0.81
LIME1-204ENST00000476183 OARD1Q9Y530 152 aa20.12■□□□□ 0.81
LIME1-204ENST00000476183 DOCK10Q96BY6 2186 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 A0A0A6YYC8 382 aaPredicted RBP20.11■□□□□ 0.81
LIME1-204ENST00000476183 I3L1I5 382 aaPredicted RBP20.11■□□□□ 0.81
LIME1-204ENST00000476183 AGPSO00116 658 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 SLC26A3P40879 764 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 SLC12A2P55011 1212 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 ILF2Q12905 390 aaKnown RBP20.11■□□□□ 0.81
LIME1-204ENST00000476183 EFTUD2Q15029 972 aaKnown RBP eCLIP20.11■□□□□ 0.814e-13■■■■■ 32.6
LIME1-204ENST00000476183 KIRREL2Q6UWL6 708 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 LAPTM4BQ86VI4 370 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 SHISA5Q8N114 240 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 PPM1NQ8N819 430 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 TEX19Q8NA77 164 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 OR4K1Q8NGD4 311 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 MIEF2Q96C03 454 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 TM4SF19Q96DZ7 209 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 THAP11Q96EK4 314 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 MMABQ96EY8 250 aaPredicted RBP20.11■□□□□ 0.81
LIME1-204ENST00000476183 DERL2Q9GZP9 239 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 DRC3Q9H069 523 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 CTNNAL1Q9UBT7 734 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 DMGDHQ9UI17 866 aaKnown RBP20.11■□□□□ 0.81
LIME1-204ENST00000476183 CDC14AQ9UNH5 594 aa20.11■□□□□ 0.81
LIME1-204ENST00000476183 UBR5O95071 2799 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms