RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SHC4Q6S5L8 630 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 PLXDC2Q6UX71 529 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CCBE1Q6UXH8 406 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF517Q6ZMY9 492 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-207ENST00000476169 Q6ZSV7 163 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CTU1Q7Z7A3 348 aaKnown RBP3.95□□□□□ -1.78
VPS13D-207ENST00000476169 RTN4RL2Q86UN3 420 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 MAP7D3Q8IWC1 876 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 STHQ8IWL8 128 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 ARFGAP1Q8N6T3 406 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 RNF148Q8N7C7 305 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 C7orf57Q8NEG2 295 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 OR52I2Q8NH67 350 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 C16orf52Q8NHV5 167 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC107Q8WV48 283 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CASP10Q92851 521 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 P2RX5Q93086 422 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 ULK4Q96C45 1275 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 COQ7Q99807 217 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CCT7Q99832 543 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 ZSCAN5AQ9BUG6 496 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 POLR1EQ9GZS1 481 aaKnown RBP3.95□□□□□ -1.78
VPS13D-207ENST00000476169 NCOR1P1Q9H4R4 102 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 YAE1D1Q9NRH1 226 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 SERINC1Q9NRX5 453 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 GPR173Q9NS66 373 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 PANK4Q9NVE7 773 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 GTSE1Q9NYZ3 720 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CNOT2Q9NZN8 540 aaKnown RBP3.95□□□□□ -1.78
VPS13D-207ENST00000476169 PTGFRNQ9P2B2 879 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 CHMP2BQ9UQN3 213 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 TMED5Q9Y3A6 229 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 HS3ST3B1Q9Y662 390 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 SPACA6W5XKT8 324 aa3.95□□□□□ -1.78
VPS13D-207ENST00000476169 HEG1Q9ULI3 1381 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 MED19A0JLT2 244 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 J3KR12 359 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CXCL11O14625 94 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PPEF2O14830 753 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 WNT9BO14905 357 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 GRID2O43424 1007 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 VPS26AO75436 327 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SPAG6O75602 509 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ATP6AP2O75787 350 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 VNN2O95498 520 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SYF2O95926 243 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CH25HO95992 272 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 KRT8P05787 483 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 UGT2B4P06133 528 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CELA2AP08217 269 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 MMP10P09238 476 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 NUDT17P0C025 328 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DLATP10515 647 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 RPA2P15927 270 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CORO1AP31146 461 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ARRB2P32121 409 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 MNDAP41218 407 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 KCNK10P57789 538 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SSTP61278 116 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 HSF2Q03933 536 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 GBE1Q04446 702 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SRSF4Q08170 494 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 CRYZQ08257 329 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DSC1Q08554 894 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PRKAA1Q13131 559 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 GK2Q14410 553 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 RBMS2Q15434 407 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 TMEM41BQ5BJD5 291 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 XKR9Q5GH70 373 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 STXBP5Q5T5C0 1151 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 FAM69BQ5VUD6 431 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 OTUD1Q5VV17 481 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 UGT3A1Q6NUS8 523 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 KLC3Q6P597 504 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ZYG11AQ6WRX3 759 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 Q6ZTK2 550 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 TAS2R42Q7RTR8 314 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF367Q7RTV3 350 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 DGLUCYQ7Z3D6 616 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PRIMA1Q86XR5 153 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 FOXRED2Q8IWF2 684 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 ZCCHC7Q8N3Z6 543 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 AADATQ8N5Z0 425 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 NANOGP1Q8N7R0 232 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 EIF1ADQ8N9N8 165 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PPFIBP2Q8ND30 876 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 OR4K1Q8NGD4 311 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 OR13C2Q8NGS9 318 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 OR2T34Q8NGX1 318 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SLC20A1Q8WUM9 679 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 SLC38A5Q8WUX1 472 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 HAS2Q92819 552 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 THOC3Q96J01 351 aaKnown RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 FAM71F1Q96KD3 344 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-207ENST00000476169 RPGRIP1Q96KN7 1286 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 TAAR6Q96RI8 345 aa3.94□□□□□ -1.78
VPS13D-207ENST00000476169 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms