RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DNAJA4Q8WW22 397 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 KLHL6Q8WZ60 621 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 KIAA1191Q96A73 305 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 BARHL1Q9BZE3 327 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 QTRT2Q9H974 415 aaKnown RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 POPDC3Q9HBV1 291 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 IL1RAPQ9NPH3 570 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 PCDHGA9Q9Y5G4 932 aaKnown RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 SNX10Q9Y5X0 201 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF236Q9UL36 1845 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 EFCAB10A6NFE3 127 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 VPS26AO75436 327 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 PTX3P26022 381 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 NDUFV1P49821 464 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 SSTP61278 116 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 HOXC5Q00444 222 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 GPR19Q15760 415 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 PTCHD3Q3KNS1 767 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 GLYR1Q49A26 553 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 FAM171A1Q5VUB5 890 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 ATG9BQ674R7 924 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 LAX1Q8IWV1 398 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 STAG3L4Q8TBR4 150 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 SGTBQ96EQ0 304 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 CRELD1Q96HD1 420 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 NFKBIZQ9BYH8 718 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 FAM126AQ9BYI3 521 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 CATSPERBQ9H7T0 1116 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 ARNT2Q9HBZ2 717 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 PCTPQ9UKL6 214 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 ELF5Q9UKW6 265 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 KLF2Q9Y5W3 355 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 COL11A1P12107 1806 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-205ENST00000475993 LCTP09848 1927 aa10.25□□□□□ -0.77
ABCF1-205ENST00000475993 MYO1GB0I1T2 1018 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ARVCFO00192 962 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 STX16O14662 325 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 APOC1P02654 83 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ITGB1P05556 798 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SRCP12931 536 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 LMO2P25791 158 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 POU1F1P28069 291 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ARSDP51689 593 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 PSPHP78330 225 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 TP53BP2Q13625 1128 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 QPRTQ15274 297 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 TATDN3Q17R31 274 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CYP27C1Q4G0S4 372 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GCNT7Q6ZNI0 430 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ZSWIM9Q86XI8 627 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 NLGN4YQ8NFZ3 816 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SLC5A11Q8WWX8 675 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 MAGEB10Q96LZ2 347 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 KLHL15Q96M94 604 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 DCLRE1CQ96SD1 692 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GABARAPL3Q9BY60 117 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ELOVL6Q9H5J4 265 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 AMBNQ9NP70 447 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 HPF1Q9NWY4 346 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 C1orf109Q9NX04 203 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 KIF17Q9P2E2 1029 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 OR12D3Q9UGF7 316 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 USP21Q9UK80 565 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 TRBV5-3A0A0A0MS03 114 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 UBA6A0AVT1 1052 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SH3D21A4FU49 640 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 OR6C65A6NJZ3 312 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 STMND1H3BQB6 276 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 SMLR1H3BR10 107 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CSF2P04141 144 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 HLA-DQB2P05538 268 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 STSP08842 583 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CSF3P09919 207 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 RAB3AP20336 220 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 AGTR2P50052 363 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CYP4F2P78329 520 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 DAB2P98082 770 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 LRFN4Q6PJG9 635 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 DBX2Q6ZNG2 339 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GPRIN3Q6ZVF9 776 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ZNF367Q7RTV3 350 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 KRT73Q86Y46 540 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 PHACTR4Q8IZ21 702 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 C10orf111Q8N326 155 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 AGBL3Q8NEM8 1001 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 RPRD1AQ96P16 312 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-205ENST00000475993 CAMKK2Q96RR4 588 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 GPR83Q9NYM4 423 aa10.24□□□□□ -0.77
ABCF1-205ENST00000475993 PGAP2Q9UHJ9 254 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms