RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 IKZF3Q9UKT9 509 aa17.64■□□□□ 0.41
COL7A1-209ENST00000474432 PYCARDQ9ULZ3 195 aa17.64■□□□□ 0.41
COL7A1-209ENST00000474432 CDC14AQ9UNH5 594 aa17.64■□□□□ 0.41
COL7A1-209ENST00000474432 PCDHGA10Q9Y5H3 936 aa17.64■□□□□ 0.41
COL7A1-209ENST00000474432 KCNE1BA0A087WTH5 132 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 A0A0A6YYC8 382 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-209ENST00000474432 I3L1I5 382 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-209ENST00000474432 SLC16A5O15375 505 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 SEMA7AO75326 666 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 KLHL18O94889 574 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 HPP00738 406 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 C8GP07360 202 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 RNF224P0DH78 156 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 COX6A1P12074 109 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 GNG11P61952 73 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 HIF1AQ16665 826 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 THEMIS2Q5TEJ8 643 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 LRRC8EQ6NSJ5 796 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 UGT3A1Q6NUS8 523 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 SYDE1Q6ZW31 735 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-209ENST00000474432 IQCKQ8N0W5 287 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 ZADH2Q8N4Q0 377 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 MCOLN3Q8TDD5 553 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 PSMF1Q92530 271 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 TM4SF19Q96DZ7 209 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 LINGO1Q96FE5 620 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 OLFM1Q99784 485 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 MACROD1Q9BQ69 325 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 SGPP1Q9BX95 441 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 LHPPQ9H008 270 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 ATG10Q9H0Y0 220 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 ZNF160Q9HCG1 818 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 CCDC177Q9NQR7 707 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-209ENST00000474432 UTP6Q9NYH9 597 aaKnown RBP17.63■□□□□ 0.41
COL7A1-209ENST00000474432 CHMP2BQ9UQN3 213 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 SCN3AQ9NY46 2000 aa17.63■□□□□ 0.41
COL7A1-209ENST00000474432 BLACEA4D250 179 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 IDSB3KWA1 339 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 TTI1O43156 1089 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 LCMT2O60294 686 aaKnown RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 ACPPP15309 386 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 NPPBP16860 134 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 FDXRP22570 491 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 RGS4P49798 205 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 ITGA8P53708 1063 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 MAT1AQ00266 395 aaKnown RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 DR1Q01658 176 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 SP140Q13342 867 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 FAM53BQ14153 422 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 HECTD2Q5U5R9 776 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 TMEM207Q6UWW9 146 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 PRSS41Q7RTY9 318 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 ADCK2Q7Z695 626 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 ZC3H7AQ8IWR0 971 aaKnown RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 PPP4R1Q8TF05 950 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 RERGQ96A58 199 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 MMABQ96EY8 250 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
COL7A1-209ENST00000474432 DRC3Q9H069 523 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 PSAT1Q9Y617 370 aa17.62■□□□□ 0.41
COL7A1-209ENST00000474432 POLEQ07864 2286 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 LOC102723996A0A087X1L8 192 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 TXNDC9O14530 226 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
COL7A1-209ENST00000474432 CBX6O95503 412 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 HRH2P25021 359 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 EMP2P54851 167 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 CBLBQ13191 982 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 NAE1Q13564 534 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 FRG1Q14331 258 aaKnown RBP17.61■□□□□ 0.41
COL7A1-209ENST00000474432 EIF2S3LQ2VIR3 472 aaKnown RBP17.61■□□□□ 0.41
COL7A1-209ENST00000474432 AGAP7PQ5VUJ5 663 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 PDIK1LQ8N165 341 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 MYO1HQ8N1T3 1032 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 OR9A4Q8NGU2 314 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 TM9SF4Q92544 642 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 LRRC39Q96DD0 335 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 CFAP36Q96G28 342 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 AGAP4Q96P64 663 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 WDR77Q9BQA1 342 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-209ENST00000474432 MKKSQ9NPJ1 570 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-209ENST00000474432 C14orf105Q9NVL8 296 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 VWA7Q9Y334 891 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 SAR1BQ9Y6B6 198 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 CPAMD8Q8IZJ3 1885 aa17.61■□□□□ 0.41
COL7A1-209ENST00000474432 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 FEZF1A0PJY2 475 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 E7ESA3 106 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 MAP2K7O14733 419 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 JRKO75564 520 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 VARSP26640 1264 aaKnown RBP17.6■□□□□ 0.41
COL7A1-209ENST00000474432 BCL6P41182 706 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 RPS15AP62244 130 aaKnown RBP17.6■□□□□ 0.41
COL7A1-209ENST00000474432 FASTKD3Q14CZ7 662 aaKnown RBP17.6■□□□□ 0.41
COL7A1-209ENST00000474432 TMEM214Q6NUQ4 689 aaKnown RBP17.6■□□□□ 0.41
COL7A1-209ENST00000474432 TMEM205Q6UW68 189 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 LCTLQ6UWM7 567 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 NDUFAF7Q7L592 441 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 OR56A3Q8NH54 315 aa17.6■□□□□ 0.41
COL7A1-209ENST00000474432 OR4K3Q96R72 315 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms