RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ELMO1Q92556 727 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MTERF3Q96E29 417 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF837Q96EG3 531 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM84BQ96KN1 310 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 COQ10AQ96MF6 247 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 FCRL3Q96P31 734 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PANX1Q96RD7 426 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PCDHB18PQ96TA0 734 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PIGQQ9BRB3 760 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ALKBH7Q9BT30 221 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 GAL3ST2Q9H3Q3 398 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC6A13Q9NSD5 602 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SAMSN1Q9NSI8 373 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SACM1LQ9NTJ5 587 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PNPOQ9NVS9 261 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SLCO1C1Q9NYB5 712 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PADI1Q9ULC6 663 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ABCG2Q9UNQ0 655 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ACOT9Q9Y305 439 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ADAMTS20P59510 1910 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 XDHP47989 1333 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TUBAL3A6NHL2 446 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF729A6NN14 1252 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 KDM4EB2RXH2 506 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TLR4O00206 839 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 EIF3HO15372 352 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MSCO60682 206 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ZBTB11O95625 1053 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NTSR2O95665 410 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MT-ND2P03891 347 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MMP3P08254 477 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 HMBSP08397 361 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ATP6V1C1P21283 382 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 DGKAP23743 735 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 HSD11B1P28845 292 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PHBP35232 272 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 THBS2P35442 1172 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 IGHMBP2P38935 993 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CASRP41180 1078 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 STAT6P42226 847 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 CDK9P50750 372 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NKX2-5P52952 324 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 AP1S1P61966 158 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 RPL7AP62424 266 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 RAD51Q06609 339 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ATP1A4Q13733 1029 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ACTBL2Q562R1 376 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SAMD5Q5TGI4 173 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM160B1Q5W0V3 765 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 WSCD1Q658N2 575 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 C19orf48Q6RUI8 117 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 C5orf46Q6UWT4 87 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 OVCH1Q7RTY7 1134 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 UNC5BQ8IZJ1 945 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SVOPQ8N4V2 548 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TP53I13Q8NBR0 393 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 OR9K2Q8NGE7 335 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 OR13F1Q8NGS4 319 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 RNASE8Q8TDE3 154 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 COPS5Q92905 334 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 LENG1Q96BZ8 264 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC7A6OSQ96CW6 309 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 DYDC2Q96IM9 177 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PBKQ96KB5 322 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 TRIB1Q96RU8 372 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PIGUQ9H490 435 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF552Q9H707 407 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 MLXIPLQ9NP71 852 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 THUMPD1Q9NXG2 353 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PLEK2Q9NYT0 353 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 UVRAGQ9P2Y5 699 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 ADAM21Q9UKJ8 722 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 DAPP1Q9UN19 280 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 NR2E1Q9Y466 385 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 PCDHGC4Q9Y5F7 938 aa5.89□□□□□ -1.47
SMARCE1-208ENST00000474246 KTN1Q86UP2 1357 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 A0A1W2PRB8 838 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC22A1O15245 554 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 WIPF1O43516 503 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 BNIP3LO60238 219 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 VPS26AO75436 327 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 DFFBO76075 338 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 F10P00742 488 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM58BPP0C7Q3 252 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 OR2T7P0C7T2 308 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 MAPTP10636 758 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CDH2P19022 906 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CXCR5P32302 372 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CYP2C18P33260 490 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PREPP48147 710 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 HOXA1P49639 335 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 CSNK1EP49674 416 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 RASSF2P50749 326 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 HK2P52789 917 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 EPHB3P54753 998 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 RPL23AP62750 156 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PTH1RQ03431 593 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 RELAQ04206 551 aa5.88□□□□□ -1.47
SMARCE1-208ENST00000474246 PRKCQQ04759 706 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms