RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 FEZF1A0PJY2 475 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 AGRPO00253 132 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 BIRC5O15392 142 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TRIM13O60858 407 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 ZWINTO95229 277 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CAPNS1P04632 268 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CHRNGP07510 517 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 C1GALT1C1LP0DN25 315 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 ITIH1P19827 911 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TAC1P20366 129 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 ITGAXP20702 1163 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CDH3P22223 829 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CMPK1P30085 196 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SCTRP47872 440 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 HSD11B2P80365 405 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 MC2RQ01718 297 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CLCQ05315 142 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 CHIT1Q13231 466 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TSTA3Q13630 321 aaPredicted RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 GPR19Q15760 415 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 PRTGQ2VWP7 1150 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 DEFB110Q30KQ9 67 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 UGT3A2Q3SY77 523 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 PHF19Q5T6S3 580 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 UNQ6494/PRO21346Q6UXR6 183 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TMPRSS11BQ86T26 416 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 C17orf64Q86WR6 236 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SLC22A9Q8IVM8 553 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 RNF175Q8N4F7 328 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 RAB42Q8N4Z0 105 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 DTWD1Q8N5C7 304 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 ANKRD42Q8N9B4 389 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SLC38A9Q8NBW4 561 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 OR1L3Q8NH93 324 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 WDR20Q8TBZ3 569 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 AGAP11Q8TF27 550 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TCTN2Q96GX1 697 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 TMEM74Q96NL1 305 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 MACROD1Q9BQ69 325 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SPRTNQ9H040 489 aaPredicted RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 STMN4Q9H169 189 aaPredicted RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 IPPKQ9H8X2 491 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 KCNK9Q9NPC2 374 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SEMA4BQ9NPR2 832 aaPredicted RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 ANKMY1Q9P2S6 941 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 MRPS2Q9Y399 296 aaKnown RBP9.92□□□□□ -0.82
CASC3-204ENST00000474190 LOXL2Q9Y4K0 774 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 KCNE2Q9Y6J6 123 aa9.92□□□□□ -0.82
CASC3-204ENST00000474190 SNRNP200O75643 2136 aaKnown RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 FITM1A5D6W6 292 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 GOLGA6L10A6NI86 522 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 B4E171 279 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 C9orf172C9J069 976 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 H0YGG7 62 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ZW10O43264 779 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 SNNO75324 88 aaPredicted RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 LYPLA1O75608 230 aaPredicted RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 RASSF9O75901 435 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 EZRP15311 586 aaKnown RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 EPB42P16452 691 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ZNF28P17035 718 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 GNAZP19086 355 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 BGNP21810 368 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 HRH2P25021 359 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 HPDP32754 393 aaPredicted RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 TSPAN7P41732 249 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 HTR6P50406 440 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 CCR8P51685 355 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ARF3P61204 181 aaPredicted RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 PPP2R2AP63151 447 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 SLBPQ14493 270 aaKnown RBP eCLIP9.91□□□□□ -0.82
CASC3-204ENST00000474190 GGTA1PQ4G0N0 100 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 TCHHL1Q5QJ38 904 aaPredicted RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 THEMIS2Q5TEJ8 643 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ARMC6Q6NXE6 501 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 MCATQ8IVS2 390 aaKnown RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 LAS2Q8IYD9 372 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 SNX31Q8N9S9 440 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 OR4F6Q8NGB9 312 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 DEPDC7Q96QD5 511 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 KCNA7Q96RP8 456 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ZNF382Q96SR6 550 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 RHBGQ9H310 441 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ASCL3Q9NQ33 180 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 FBXO8Q9NRD0 319 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 HAO1Q9UJM8 370 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 SNX7Q9UNH6 387 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 AHCTF1Q8WYP5 2266 aa9.91□□□□□ -0.82
CASC3-204ENST00000474190 ASH1LQ9NR48 2969 aaKnown RBP9.91□□□□□ -0.82
CASC3-204ENST00000474190 CCDC187A0A096LP49 1063 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 A0A0J9YVX5 310 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 WDR91A4D1P6 747 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 EFCAB7A8K855 629 aa9.9□□□□□ -0.82
CASC3-204ENST00000474190 NPHS1O60500 1241 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms