RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 KCNE2Q9Y6J6 123 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 MDC1Q14676 2089 aaKnown RBP13.56□□□□□ -0.24
VAMP4-203ENST00000474047 FEZF1A0PJY2 475 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 ARGFXA6NJG6 315 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 MKRN2OSH3BPM6 223 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 PEX12O00623 359 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 RFPL1O75677 317 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 ALBP02768 609 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 STATHP02808 62 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 CD1DP15813 335 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
VAMP4-203ENST00000474047 GCGRP47871 477 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 GARNL3Q5VVW2 1013 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 TAOK1Q7L7X3 1001 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 CMC1Q7Z7K0 106 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 CAMKVQ8NCB2 501 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 OR2Y1Q8NGV0 311 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.56□□□□□ -0.24
VAMP4-203ENST00000474047 SLC5A11Q8WWX8 675 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 EXT2Q93063 718 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 IP6K3Q96PC2 410 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 CNOT10Q9H9A5 744 aaKnown RBP13.56□□□□□ -0.24
VAMP4-203ENST00000474047 ENAMQ9NRM1 1142 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 WWOXQ9NZC7 414 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 RNF112Q9ULX5 631 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 SLC22A14Q9Y267 594 aa13.56□□□□□ -0.24
VAMP4-203ENST00000474047 OR1F1O43749 312 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 KLF7O75840 302 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 WDR47O94967 919 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 LTA4HP09960 611 aaKnown RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 PMS2P54278 862 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 MEF2AQ02078 507 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 NFATC3Q12968 1075 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 BMPR2Q13873 1038 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 TGFBIQ15582 683 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 ZKSCAN8Q15776 578 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 MRPL14Q6P1L8 145 aaKnown RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 C9orf43Q8TAL5 461 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 STAG3L4Q8TBR4 150 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 DRC3Q9H069 523 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 SLC25A18Q9H1K4 315 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 ZNF282Q9UDV7 671 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 TUBD1Q9UJT1 453 aa13.55□□□□□ -0.24
VAMP4-203ENST00000474047 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 G3BP2Q9UN86 482 aaKnown RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 HEMK1Q9Y5R4 338 aaPredicted RBP13.55□□□□□ -0.24
VAMP4-203ENST00000474047 CCDC88CQ9P219 2028 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 KCNE1BA0A087WTH5 132 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 A0A087WUV0 522 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-203ENST00000474047 A0A087X1B8 175 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 H2AFYO75367 372 aaKnown RBP13.54□□□□□ -0.24
VAMP4-203ENST00000474047 SERPIND1P05546 499 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ITGAXP20702 1163 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 TYK2P29597 1187 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 MSH2P43246 934 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 AVPR1BP47901 424 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 CCL11P51671 97 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 RRADP55042 308 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ZXDCQ2QGD7 858 aaPredicted RBP13.54□□□□□ -0.24
VAMP4-203ENST00000474047 CATSPEREQ5SY80 951 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 CCDC91Q7Z6B0 441 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ASPGQ86U10 573 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ZNF843Q8N446 348 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 SLC13A3Q8WWT9 602 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 KIAA1191Q96A73 305 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 RHBDF1Q96CC6 855 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 MVB12AQ96EY5 273 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 UBXN10Q96LJ8 280 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 C10orf90Q96M02 699 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 OR4K3Q96R72 315 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 AIF1LQ9BQI0 150 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ING2Q9H160 280 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 ALG9Q9H6U8 611 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 WDR54Q9H977 334 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 SLC22A11Q9NSA0 550 aa13.54□□□□□ -0.24
VAMP4-203ENST00000474047 FER1L5A0AVI2 2057 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 A0A0A6YYC8 382 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 I3L1I5 382 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 P2RX6O15547 441 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 WISP3O95389 354 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ONECUT2O95948 504 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 IGHEP01854 428 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SLC35G6P0C7Q6 338 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 TFEBP19484 476 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ECHS1P30084 290 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 BCL6P41182 706 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SERPINB8P50452 374 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 SERPINB9P50453 376 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 CHAF1BQ13112 559 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 ATP1A4Q13733 1029 aa13.53□□□□□ -0.24
VAMP4-203ENST00000474047 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms