RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ZNF534Q76KX8 674 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 FGD2Q7Z6J4 655 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 DOLPP1Q86YN1 238 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 BEST3Q8N1M1 668 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CSNK1A1LQ8N752 337 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 OR8K1Q8NGG5 319 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 OR13J1Q8NGT2 312 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CA5BP1Q8WTZ4 195 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 SDCCAG3Q96C92 435 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 LRRC45Q96CN5 670 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 GBP4Q96PP9 640 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CHP1Q99653 195 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NPAS2Q99743 824 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 FAM118BQ9BPY3 351 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 VKORC1Q9BQB6 163 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ANP32EQ9BTT0 268 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 TUBB6Q9BUF5 446 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 YIPF2Q9BWQ6 316 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CARD6Q9BX69 1037 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 VN1R1Q9GZP7 353 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 DRC3Q9H069 523 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CXXC4Q9H2H0 198 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 LRRC40Q9H9A6 602 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NHEJ1Q9H9Q4 299 aaPredicted RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 IFNKQ9P0W0 207 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 INTUQ9ULD6 942 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 MKL2Q9ULH7 1088 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 PPT2Q9UMR5 302 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NPIPA1Q9UND3 350 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 CDC14AQ9UNH5 594 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 RUVBL2Q9Y230 463 aaKnown RBP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ASB1Q9Y576 335 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 ALG6Q9Y672 507 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NFS1Q9Y697 457 aa4.85□□□□□ -1.63
SNRNP40-204ENST00000474025 NBEAL1Q6ZS30 2694 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SCN2AQ99250 2005 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 A0A0A6YYC8 382 aaPredicted RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 IGHV3-20A0A0C4DH32 117 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TMEM200CA6NKL6 621 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 FAM171A2A8MVW0 826 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 F8W8V4 182 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 I3L1I5 382 aaPredicted RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 P2RX6O15547 441 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ASNA1O43681 348 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 LILRA1O75019 489 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 PHF2O75151 1096 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 VPS26AO75436 327 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 NEURL1O76050 574 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 METTL18O95568 372 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TSPAN12O95859 305 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 GOT2P00505 430 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 APOA4P06727 396 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CYC1P08574 325 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ANXA5P08758 320 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ERGP11308 486 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CTNNA2P26232 953 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 MSX1P28360 303 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 EEF1DP29692 281 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 DNAJA1P31689 397 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 PTPN7P35236 360 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CD96P40200 585 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ST13P50502 369 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TPM4P67936 248 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 MAT1AQ00266 395 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ACVR1Q04771 509 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 FAM53BQ14153 422 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 FASTKQ14296 549 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SEMA3AQ14563 771 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 NAA25Q14CX7 972 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TMED2Q15363 201 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 OR1C1Q15619 314 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 PARP6Q2NL67 630 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 BTBD16Q32M84 506 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 RNFT1Q5M7Z0 435 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 GARNL3Q5VVW2 1013 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SPINK14Q6IE38 97 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 ZNF425Q6IV72 752 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 C11orf63Q6NUN7 778 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 LRRC8BQ6P9F7 803 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 AFTPHQ6ULP2 937 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CPEB2Q7Z5Q1 589 aaKnown RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 PAQR7Q86WK9 346 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TGIF2LYQ8IUE0 185 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 CRLF3Q8IUI8 442 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 DMRTC2Q8IXT2 367 aaPredicted RBP4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 SHISA5Q8N114 240 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 KRT222Q8N1A0 295 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 GHDCQ8N2G8 530 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 MARVELD2Q8N4S9 558 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 RAB42Q8N4Z0 105 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 FAM71DQ8N9W8 422 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 TMEM178AQ8NBL3 297 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 RNF217Q8TC41 542 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 METTL21AQ8WXB1 218 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 NRGNQ92686 78 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 HDAC10Q969S8 669 aa4.84□□□□□ -1.63
SNRNP40-204ENST00000474025 RAD51AP1Q96B01 352 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms