RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 WDR93Q6P2C0 686 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PLD3Q8IV08 490 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CAMKVQ8NCB2 501 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PDPRQ8NCN5 879 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 ABHD11Q8NFV4 315 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 NEIL2Q969S2 332 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 ZNF285Q96NJ3 590 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CATSPER2Q96P56 530 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 OR4K3Q96R72 315 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 AIF1LQ9BQI0 150 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 DHRS4Q9BTZ2 278 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PELI2Q9HAT8 420 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 IL17BQ9UHF5 180 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PCDHGA6Q9Y5G7 932 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 BAHCC1Q9P281 2608 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 KCNE1BA0A087WTH5 132 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 OR1F1O43749 312 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 SLC35G6P0C7Q6 338 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 F8A1P23610 371 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 GGT5P36269 586 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 GMPRP36959 345 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 GDF5P43026 501 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 EMP3P54852 163 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 IFFO1Q0D2I5 559 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 CDC16Q13042 620 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 ZXDCQ2QGD7 858 aaPredicted RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 NKAIN1Q4KMZ8 207 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 CATSPEREQ5SY80 951 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 PRMT9Q6P2P2 845 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 NXPE4Q6UWF7 544 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 LRRC70Q7Z2Q7 622 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 CENPLQ8N0S6 344 aaPredicted RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 ENDOVQ8N8Q3 282 aaKnown RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 SLC13A3Q8WWT9 602 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 ISL2Q96A47 359 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 GBP5Q96PP8 586 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 ARHGAP9Q9BRR9 750 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 CD244Q9BZW8 370 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 ACTL8Q9H568 366 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 AKIRIN1Q9H9L7 192 aaPredicted RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 GPRC5BQ9NZH0 403 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 TBK1Q9UHD2 729 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 PTBP2Q9UKA9 531 aaKnown RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 SH2B3Q9UQQ2 575 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 MRPS18BQ9Y676 258 aaKnown RBP13.13□□□□□ -0.31
USF1-205ENST00000473969 ATRXP46100 2492 aa13.13□□□□□ -0.31
USF1-205ENST00000473969 WDFY3Q8IZQ1 3526 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 TRBC2A0A5B9 178 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 UBXN8O00124 270 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 NKX2-8O15522 239 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 SMIM24O75264 130 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 CREG1O75629 220 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 SERPIND1P05546 499 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 SLC6A12P48065 614 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 MEF2AQ02078 507 aaPredicted RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 ERV3-1Q14264 604 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 NCF4Q15080 339 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 PDK4Q16654 411 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 HIST2H2ACQ16777 129 aaPredicted RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 PRTGQ2VWP7 1150 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 HIST2H2AA3Q6FI13 130 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 ZNF517Q6ZMY9 492 aaPredicted RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 TIFABQ6ZNK6 161 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 SYVN1Q86TM6 617 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 ASPGQ86U10 573 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 KLHDC8AQ8IYD2 350 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 KRT78Q8N1N4 520 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 MFSD9Q8NBP5 474 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 ATOH8Q96SQ7 321 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 OPTCQ9UBM4 332 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 TMCO1Q9UM00 188 aa13.12□□□□□ -0.31
USF1-205ENST00000473969 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 TNPO3Q9Y5L0 923 aaKnown RBP13.12□□□□□ -0.31
USF1-205ENST00000473969 CDC14CA4D256 554 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 URADA6NGE7 173 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 SMIM23A6NLE4 172 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 MAP2K7O14733 419 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 TAPBPO15533 448 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms