RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FBXO2Q9UK22 296 aaPredicted RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PYCARDQ9ULZ3 195 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 CHD5Q8TDI0 1954 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 TDRD6O60522 2096 aaKnown RBP1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PIKFYVEQ9Y2I7 2098 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 ANAPC1Q9H1A4 1944 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 THSD7BQ9C0I4 1608 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 BSNQ9UPA5 3926 aa1.44□□□□□ -2.18
CCDC39-203ENST00000473854 PLXNA3P51805 1871 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 NYNRINQ9P2P1 1898 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 MYO3BQ8WXR4 1341 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF541Q9H0D2 1346 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 COL6A3P12111 3177 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 MYOFQ9NZM1 2061 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TSPY2A6NKD2 308 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 EIF4E1BA6NMX2 242 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CPLX1O14810 134 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 HAT1O14929 419 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 PPIP5K2O43314 1243 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SLC37A4O43826 429 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CREB3O43889 395 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KINO60870 393 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 BBOX1O75936 387 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KCNK5O95279 499 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TDP2O95551 362 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ADCY5O95622 1261 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 IGKV3-11P04433 115 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TSPY3P0CV98 308 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TSPY8P0CW00 308 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC192P0DO97 292 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SCG2P13521 617 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF18P17022 549 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 GGT5P36269 586 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 MMP12P39900 470 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 PIK3CAP42336 1068 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SYKP43405 635 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF75DP51815 510 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 FKBP1AP62942 108 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 GSTO1P78417 241 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CCZ1BP86790 482 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CCZ1P86791 482 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TFAP4Q01664 338 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TLE2Q04725 743 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 GOLGA8DPQ0D2H9 430 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 GALNT2Q10471 571 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TCP10Q12799 353 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 PNOCQ13519 176 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 DCTN2Q13561 401 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 C3AR1Q16581 482 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 STX1AQ16623 288 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 UBE2SQ16763 222 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 GSTA3Q16772 222 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ALG11Q2TAA5 492 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 XKR4Q5GH76 650 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 XKR3Q5GH77 459 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ADALQ6DHV7 355 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TMED8Q6PL24 325 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SARM1Q6SZW1 724 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CCDC73Q6ZRK6 1079 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZSCAN30Q86W11 494 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 HEATR4Q86WZ0 1026 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 IQCA1Q86XH1 822 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 MARVELD2Q8N4S9 558 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SLC5A8Q8N695 610 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 C4orf32Q8N8J7 132 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SPC24Q8NBT2 197 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KCNG4Q8TDN1 519 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 HTRA1Q92743 480 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF622Q969S3 477 aaKnown RBP eCLIP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SYAP1Q96A49 352 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZBTB10Q96DT7 871 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZBED3Q96IU2 234 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 EPSTI1Q96J88 318 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SERAC1Q96JX3 654 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF396Q96N95 335 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF830Q96NB3 372 aaPredicted RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 UBAC1Q9BSL1 405 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SPZ1Q9BXG8 430 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 COA1Q9GZY4 146 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 TNMDQ9H2S6 317 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KIF9Q9HAQ2 790 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 RBM28Q9NW13 759 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 MPP6Q9NZW5 540 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 PGAP2Q9UHJ9 254 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 NRBP1Q9UHY1 535 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 HAO1Q9UJM8 370 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CFAP45Q9UL16 551 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 SLC7A7Q9UM01 511 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 NOL7Q9UMY1 257 aaKnown RBP1.43□□□□□ -2.18
CCDC39-203ENST00000473854 STX8Q9UNK0 236 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 CRYL1Q9Y2S2 319 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 KIF3AQ9Y496 699 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 ATP6V1DQ9Y5K8 247 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 PLXNA4Q9HCM2 1894 aa1.43□□□□□ -2.18
CCDC39-203ENST00000473854 NCOR1O75376 2440 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 SYNRGQ9UMZ2 1314 aa1.42□□□□□ -2.18
CCDC39-203ENST00000473854 HELZP42694 1942 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 MTCL1Q9Y4B5 1905 aaKnown RBP1.42□□□□□ -2.18
CCDC39-203ENST00000473854 A0A0C4DFX4 3053 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms