RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 LPAR4Q99677 370 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 CARD6Q9BX69 1037 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 VN1R1Q9GZP7 353 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 LRRC40Q9H9A6 602 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 MRPS30Q9NP92 439 aaKnown RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 MAP1AP78559 2803 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 A0A1B0GTH9 108 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 KLRC4-KLRK1H3BQV0 150 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 NDC80O14777 642 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 KLK8O60259 260 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 CTAG2O75638 210 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 PTGER1P34995 402 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 RPA3P35244 121 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 HKDC1Q2TB90 917 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 FBXO42Q6P3S6 717 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 BBS12Q6ZW61 710 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 CHERPQ8IWX8 916 aaKnown RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 PANX3Q96QZ0 392 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 PLCD4Q9BRC7 762 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
SMURF1-203ENST00000472627 ZNHIT6Q9NWK9 470 aaKnown RBP13.14□□□□□ -0.31
SMURF1-203ENST00000472627 ZNF839A8K0R7 811 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 ZNHIT1O43257 154 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 OR1I1O60431 355 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 TPH1P17752 444 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 FOXN2P32314 431 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 ADAM8P78325 824 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
SMURF1-203ENST00000472627 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 MARVELD2Q8N4S9 558 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 OR5M3Q8NGP4 307 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 MBD6Q96DN6 1003 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 C18orf12Q96KH6 178 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 SARGQ9BW04 601 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 ACAT2Q9BWD1 397 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 ANAPC5Q9UJX4 755 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
SMURF1-203ENST00000472627 FLNAP21333 2647 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 HCFC1P51610 2035 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 CCDC162PA2VCL2 907 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 FAM47E-STBD1D6RA91 191 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 FCHO1O14526 889 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 PSMD3O43242 534 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 PROM1O43490 865 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 FOXS1O43638 330 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 NRP2O60462 931 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 C1orf105O95561 183 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 RBP3P10745 1247 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 TFEBP19484 476 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 AOAHP28039 575 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 XCR1P46094 333 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 BDKRB1P46663 353 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 RELAQ04206 551 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 PMPCAQ10713 525 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 P3H1Q32P28 736 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 PTRHD1Q6GMV3 140 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 ADCK2Q7Z695 626 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 LINC00523Q86TU6 105 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 RPS19BP1Q86WX3 136 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 OR10Q1Q8NGQ4 319 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 OR51Q1Q8NH59 317 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 NUDT8Q8WV74 236 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 NANOS1Q8WY41 292 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 SMPDL3AQ92484 453 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 EBNA1BP2Q99848 306 aaKnown RBP13.12□□□□□ -0.31
SMURF1-203ENST00000472627 HEMGNQ9BXL5 484 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 C10orf88Q9H8K7 445 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
SMURF1-203ENST00000472627 MROH6A6NGR9 719 aa13.11□□□□□ -0.31
SMURF1-203ENST00000472627 OR51F1A6NGY5 319 aa13.11□□□□□ -0.31
SMURF1-203ENST00000472627 FIGNL2A6NMB9 653 aa13.11□□□□□ -0.31
SMURF1-203ENST00000472627 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
SMURF1-203ENST00000472627 NSA2O95478 260 aaKnown RBP13.11□□□□□ -0.31
SMURF1-203ENST00000472627 GYPCP04921 128 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms