RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SERPING1P05155 500 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 HLA-DQB2P05538 268 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 PDHA1P08559 390 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 H2AFZP0C0S5 128 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MYBL2P10244 700 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 PIM1P11309 404 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 MTHFD1P11586 935 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 GYPEP15421 78 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ALOX15P16050 662 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 ZNF8P17098 575 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 TYRP1P17643 537 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 HK1P19367 917 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MSH3P20585 1137 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MAKP20794 623 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 FPR1P21462 350 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 GNLYP22749 145 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ELAVL4P26378 380 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 CRHR1P34998 444 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 CD86P42081 329 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ARHGAP25P42331 645 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ARCN1P48444 511 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 KLK7P49862 253 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 NRG3P56975 720 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 RIPPLY3P57055 190 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 DSC2Q02487 901 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 PLOD1Q02809 727 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 CDK18Q07002 472 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 AP1B1Q10567 949 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 TRIM14Q14142 442 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 TFDP2Q14188 446 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 DPYSL3Q14195 570 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ODF1Q14990 250 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 NAA25Q14CX7 972 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 NCF4Q15080 339 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 INPP5JQ15735 1006 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 INAQ16352 499 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SMN1Q16637 294 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 CYP2A13Q16696 494 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 RABL3Q5HYI8 236 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ATP1A1-AS1Q5TC04 95 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 LRRC38Q5VT99 294 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ALS2CLQ60I27 953 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 B3GNTL1Q67FW5 361 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ITPRIPL1Q6GPH6 555 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 PWWP2BQ6NUJ5 590 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 JMJD6Q6NYC1 403 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 SARM1Q6SZW1 724 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 IGFL3Q6UXB1 125 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ZNF517Q6ZMY9 492 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 FAM92BQ6ZTR7 304 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 CYP4V2Q6ZWL3 525 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 H2AFVQ71UI9 128 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 GLT6D1Q7Z4J2 308 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 IRF2BP2Q7Z5L9 587 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MRGPREQ86SM8 312 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ADGRG6Q86SQ4 1221 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 DAAM2Q86T65 1068 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 TICAM1Q8IUC6 712 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SYTL1Q8IYJ3 562 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 AMER2Q8N7J2 671 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 GLIS1Q8NBF1 620 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ACVR1CQ8NER5 493 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 OR5M3Q8NGP4 307 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 CT55Q8WUE5 264 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 JADE3Q92613 823 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 RSC1A1Q92681 617 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 FAF2Q96CS3 445 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 IMP4Q96G21 291 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 DCUN1D1Q96GG9 259 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 SMAD5Q99717 465 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 SYT11Q9BT88 431 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 AP1M1Q9BXS5 423 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MAGEB5Q9BZ81 275 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 CHRNA10Q9GZZ6 450 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 EPS8L2Q9H6S3 715 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 KIR3DX1Q9H7L2 352 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 ACTR5Q9H9F9 607 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 MRM3Q9HC36 420 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 IMP3Q9NV31 184 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 ZNHIT6Q9NWK9 470 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 HRASLS2Q9NWW9 162 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 DDX56Q9NY93 547 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 CTTNBP2NLQ9P2B4 639 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MYO1AQ9UBC5 1043 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 FEZ2Q9UHY8 353 aaPredicted RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 SERTAD3Q9UJW9 196 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 NXT1Q9UKK6 140 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 FARSAQ9Y285 508 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 B3GNT3Q9Y2A9 372 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 DNAJC16Q9Y2G8 782 aa3.39□□□□□ -1.87
XRN1-209ENST00000472625 MRPS18BQ9Y676 258 aaKnown RBP3.39□□□□□ -1.87
XRN1-209ENST00000472625 DOPEY1Q5JWR5 2465 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SCN8AQ9UQD0 1980 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 SDK2Q58EX2 2172 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 USP9XQ93008 2570 aaPredicted RBP3.38□□□□□ -1.87
XRN1-209ENST00000472625 A0A1B0GUH1 482 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 C17orf113A0A1B0GUU1 675 aa3.38□□□□□ -1.87
XRN1-209ENST00000472625 GSAPA4D1B5 854 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms