RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 IMMP1LQ96LU5 166 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 PRAP1Q96NZ9 151 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 PANX3Q96QZ0 392 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 OR2A5Q96R48 311 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 C19orf43Q9BQ61 176 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 RAB11FIP5Q9BXF6 653 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 VN1R1Q9GZP7 353 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 SH2B3Q9UQQ2 575 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 KLF2Q9Y5W3 355 aaPredicted RBP9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 CAPN6Q9Y6Q1 641 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 SCN3AQ9NY46 2000 aa9.55□□□□□ -0.88
SCAMP3-205ENST00000472397 LOC102723996A0A087X1L8 192 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 SMAPO00193 183 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 TTI1O43156 1089 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 AVILO75366 819 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 VPS26AO75436 327 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 SUN1O94901 812 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ARNTP27540 789 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 PPARGP37231 505 aaPredicted RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 FDFT1P37268 417 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 KCNJ1P48048 391 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 TTPAP49638 278 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 VPS41P49754 854 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 NR0B1P51843 470 aaKnown RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 BASP1P80723 227 aaKnown RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 TLE4Q04727 773 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 OR1C1Q15619 314 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 OASLQ15646 514 aaKnown RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 MAPKAPK3Q16644 382 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ANKRD20A4Q4UJ75 823 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 AARS2Q5JTZ9 985 aaKnown RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 PCID2Q5JVF3 399 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ZNF468Q5VIY5 522 aaPredicted RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ICE2Q659A1 982 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 TMEM205Q6UW68 189 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 MEX3BQ6ZN04 569 aaKnown RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CEP128Q6ZU80 1094 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 GALNTL5Q7Z4T8 443 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 ANKRD37Q7Z713 158 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 MPP5Q8N3R9 675 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CCDC89Q8N998 374 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 OR5T3Q8NGG3 340 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 OR51Q1Q8NH59 317 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 DNAJB8Q8NHS0 232 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 LPGAT1Q92604 370 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 TSLPQ969D9 159 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 PEX11GQ96HA9 241 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 BIRC8Q96P09 236 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CYTH2Q99418 400 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 DRC3Q9H069 523 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CDCP1Q9H5V8 836 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CHST11Q9NPF2 352 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 MKKSQ9NPJ1 570 aaPredicted RBP9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 SPATA7Q9P0W8 599 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 MEMO1Q9Y316 297 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
SCAMP3-205ENST00000472397 GABRR3A8MPY1 467 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 A8MUA0 341 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 RDH16O75452 317 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 PDE9AO76083 593 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 IPO7O95373 1038 aaKnown RBP9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 CLDN14O95500 239 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SLC16A8O95907 504 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ABOP16442 354 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 PTGER4P35408 488 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 XCR1P46094 333 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 AVPR1BP47901 424 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SMSP52788 366 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ACTN3Q08043 901 aaPredicted RBP9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SFT2D3Q587I9 215 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 RNFT1Q5M7Z0 435 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ZNF425Q6IV72 752 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 RPTNQ6XPR3 784 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 MBOAT1Q6ZNC8 495 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 FGD2Q7Z6J4 655 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 CDH24Q86UP0 819 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SPPL2CQ8IUH8 684 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ARHGEF39Q8N4T4 335 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 KCT2Q8NC54 265 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 GIMAP7Q8NHV1 300 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 AGAP11Q8TF27 550 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ZNF480Q8WV37 535 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SDCCAG3Q96C92 435 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 GPR137Q96N19 417 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 TUBB6Q9BUF5 446 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 FBXO6Q9NRD1 293 aaPredicted RBP9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 TREX1Q9NSU2 369 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 C14orf105Q9NVL8 296 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 SCN2AQ99250 2005 aa9.53□□□□□ -0.88
SCAMP3-205ENST00000472397 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.88
SCAMP3-205ENST00000472397 NKX2-6A6NCS4 301 aa9.52□□□□□ -0.89
SCAMP3-205ENST00000472397 FAM90A27PA6NNH2 459 aa9.52□□□□□ -0.89
SCAMP3-205ENST00000472397 E5RI56 91 aa9.52□□□□□ -0.89
SCAMP3-205ENST00000472397 PRPF4O43172 522 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCAMP3-205ENST00000472397 CDC40O60508 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCAMP3-205ENST00000472397 MATN4O95460 622 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms