RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 WISP1O95388 367 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SLC16A8O95907 504 aa8.78□□□□□ -1
SMC4-213ENST00000472282 C2P06681 752 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SNRPAP09012 282 aaKnown RBP8.78□□□□□ -1
SMC4-213ENST00000472282 ERGP11308 486 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CD1DP15813 335 aa8.78□□□□□ -1
SMC4-213ENST00000472282 UGT2B7P16662 529 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CDH3P22223 829 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CNTFP26441 200 aa8.78□□□□□ -1
SMC4-213ENST00000472282 PSMB5P28074 263 aa8.78□□□□□ -1
SMC4-213ENST00000472282 IMPA1P29218 277 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CRABP2P29373 138 aa8.78□□□□□ -1
SMC4-213ENST00000472282 TYK2P29597 1187 aa8.78□□□□□ -1
SMC4-213ENST00000472282 MAGEA12P43365 314 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SLCO1A2P46721 670 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CSRP3P50461 194 aa8.78□□□□□ -1
SMC4-213ENST00000472282 RPS18P62269 152 aaKnown RBP8.78□□□□□ -1
SMC4-213ENST00000472282 DLG1Q12959 904 aa8.78□□□□□ -1
SMC4-213ENST00000472282 TSTA3Q13630 321 aaPredicted RBP8.78□□□□□ -1
SMC4-213ENST00000472282 FASTKQ14296 549 aaKnown RBP8.78□□□□□ -1
SMC4-213ENST00000472282 TSNQ15631 228 aaKnown RBP8.78□□□□□ -1
SMC4-213ENST00000472282 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.78□□□□□ -1
SMC4-213ENST00000472282 LCN10Q6JVE6 187 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SBSNQ6UWP8 590 aa8.78□□□□□ -1
SMC4-213ENST00000472282 FRA10AC1Q70Z53 315 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ADAMTSL2Q86TH1 951 aa8.78□□□□□ -1
SMC4-213ENST00000472282 TBC1D1Q86TI0 1168 aaPredicted RBP8.78□□□□□ -1
SMC4-213ENST00000472282 TRIM73Q86UV7 250 aa8.78□□□□□ -1
SMC4-213ENST00000472282 PPP1R3BQ86XI6 285 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SYTL1Q8IYJ3 562 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CENPLQ8N0S6 344 aaPredicted RBP8.78□□□□□ -1
SMC4-213ENST00000472282 D2HGDHQ8N465 521 aa8.78□□□□□ -1
SMC4-213ENST00000472282 RAB42Q8N4Z0 105 aa8.78□□□□□ -1
SMC4-213ENST00000472282 MREGQ8N565 214 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SLC38A9Q8NBW4 561 aa8.78□□□□□ -1
SMC4-213ENST00000472282 PPFIBP2Q8ND30 876 aa8.78□□□□□ -1
SMC4-213ENST00000472282 OR2W6PQ8NHA6 318 aa8.78□□□□□ -1
SMC4-213ENST00000472282 MCOLN3Q8TDD5 553 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ZNF480Q8WV37 535 aa8.78□□□□□ -1
SMC4-213ENST00000472282 KCTD4Q8WVF5 259 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ISL2Q96A47 359 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ZNF501Q96CX3 271 aaPredicted RBP8.78□□□□□ -1
SMC4-213ENST00000472282 UBXN10Q96LJ8 280 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CCDC77Q9BR77 488 aa8.78□□□□□ -1
SMC4-213ENST00000472282 VPS11Q9H270 941 aa8.78□□□□□ -1
SMC4-213ENST00000472282 PARVBQ9HBI1 364 aa8.78□□□□□ -1
SMC4-213ENST00000472282 LHX9Q9NQ69 397 aa8.78□□□□□ -1
SMC4-213ENST00000472282 FGF21Q9NSA1 209 aa8.78□□□□□ -1
SMC4-213ENST00000472282 OR6C2Q9NZP2 312 aa8.78□□□□□ -1
SMC4-213ENST00000472282 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.78□□□□□ -1
SMC4-213ENST00000472282 TBK1Q9UHD2 729 aa8.78□□□□□ -1
SMC4-213ENST00000472282 RARRES3Q9UL19 164 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ACOT9Q9Y305 439 aa8.78□□□□□ -1
SMC4-213ENST00000472282 KCNMB2Q9Y691 235 aa8.78□□□□□ -1
SMC4-213ENST00000472282 A0A087X1B8 175 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 IQANK1A0A1B0GTG1 560 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 A0A1W2PPV9 198 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 SLC9B1P1A6NJY1 282 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 KATNA1O75449 491 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 GUCA1CO95843 209 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 ALBP02768 609 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 ENO2P09104 434 aaPredicted RBP8.77□□□□□ -1.01
SMC4-213ENST00000472282 LTA4HP09960 611 aaKnown RBP8.77□□□□□ -1.01
SMC4-213ENST00000472282 NUDT17P0C025 328 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 HIST1H2AGP0C0S8 130 aaPredicted RBP8.77□□□□□ -1.01
SMC4-213ENST00000472282 SFTPCP11686 197 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 PVRP15151 417 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 TFEBP19484 476 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 HIST1H2ADP20671 130 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 PRDX3P30048 256 aaKnown RBP8.77□□□□□ -1.01
SMC4-213ENST00000472282 PNLIPRP1P54315 467 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 ATP6V0D1P61421 351 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 TLE1Q04724 770 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 GPS2Q13227 327 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 DNASE1L3Q13609 305 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 KIR2DS3Q14952 304 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 OR4D1Q15615 310 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 CYP2A13Q16696 494 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 PPP1R3AQ16821 1122 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 LGSNQ5TDP6 509 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 FAM69BQ5VUD6 431 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 SPESP1Q6UW49 350 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 SUSD1Q6UWL2 747 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 ATG14Q6ZNE5 492 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 FAM20CQ8IXL6 584 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 FLVCR1-AS1Q8TAF5 88 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 HMGCLL1Q8TB92 370 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 ANKRD7Q92527 254 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 EXT2Q93063 718 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 PTERQ96BW5 349 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 NXNL1Q96CM4 212 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 HIST1H2AHQ96KK5 128 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 CATSPER2Q96P56 530 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 OR2A14Q96R47 310 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 CD180Q99467 661 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 HIST1H2AJQ99878 128 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 H2AFJQ9BTM1 129 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 EFHD1Q9BUP0 239 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 TRIM54Q9BYV2 358 aa8.77□□□□□ -1.01
SMC4-213ENST00000472282 TWSG1Q9GZX9 223 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms