RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNF146Q15072 292 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 C4orf50Q6ZRC1 276 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 LINC00346Q8IVM7 164 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 TAGAPQ8N103 731 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 SLC34A3Q8N130 599 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 GPC2Q8N158 579 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 OR52B6Q8NGF0 335 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 PTERQ96BW5 349 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 MAF1Q9H063 256 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 NLGN3Q9NZ94 848 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.55□□□□□ -1.84
CD46-213ENST00000471987 SH3BP5O60239 455 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 CD27P26842 260 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 ERVK-16P61578 105 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 FHL5Q5TD97 284 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 CLEC4GQ6UXB4 293 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 C1orf122Q6ZSJ8 110 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 SLC24A5Q71RS6 500 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 RHOXF1Q8NHV9 184 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 NSMAFQ92636 917 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 JAKMIP2Q96AA8 810 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 TMCO6Q96DC7 493 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 CDCA3Q99618 268 aaPredicted RBP3.54□□□□□ -1.84
CD46-213ENST00000471987 GOLPH3LQ9H4A5 285 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 TNFRSF19Q9NS68 423 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 B4GALT7Q9UBV7 327 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 SLC24A2Q9UI40 661 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 CPSF3Q9UKF6 684 aaKnown RBP3.54□□□□□ -1.84
CD46-213ENST00000471987 VSIG4Q9Y279 399 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 RPS6KL1Q9Y6S9 549 aa3.54□□□□□ -1.84
CD46-213ENST00000471987 IGKV6D-21A0A0A0MT36 114 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 IGHV3-38A0A0C4DH36 116 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 TLX2O43763 284 aaPredicted RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 CETN2P41208 172 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 LHX1P48742 406 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 DLK1P80370 383 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 POU5F1Q01860 360 aaKnown RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 OPCMLQ14982 345 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 WTAPQ15007 396 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 CATSPER3Q86XQ3 398 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 RYBPQ8N488 228 aaPredicted RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 KLHL30-AS1Q8NEE0 82 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 NSUN4Q96CB9 384 aaKnown RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 EVI5LQ96CN4 794 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 RSRC1Q96IZ7 334 aaKnown RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 UBAC1Q9BSL1 405 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 GHITMQ9H3K2 345 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 ANKZF1Q9H8Y5 726 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 CDH20Q9HBT6 801 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.53□□□□□ -1.843e-7■■■■■ 37
CD46-213ENST00000471987 PPIEQ9UNP9 301 aaKnown RBP3.53□□□□□ -1.84
CD46-213ENST00000471987 ARID2Q68CP9 1835 aa3.53□□□□□ -1.84
CD46-213ENST00000471987 IQCMA0A1B0GVH7 501 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 FSD2A1L4K1 749 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 CASTOR2A6NHX0 329 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 GLOD5A6NK44 160 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 CCER2I3L3R5 266 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 ZNF354AO60765 605 aaPredicted RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 SAGP10523 405 aaPredicted RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 DEKP35659 375 aaKnown RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 RXRGP48443 463 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 ASCL1P50553 236 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 NDST2P52849 883 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 PSMC6P62333 389 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 NPTX1Q15818 432 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 RNLSQ5VYX0 342 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 OLFML2AQ68BL7 652 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 CASC1Q6TDU7 716 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 IL17RELQ6ZVW7 336 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 TEX19Q8NA77 164 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 CSNK1G2-AS1Q8NCQ2 148 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 EGLN3Q9H6Z9 239 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 MRPL15Q9P015 296 aaKnown RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 ADD3Q9UEY8 706 aaKnown RBP3.52□□□□□ -1.85
CD46-213ENST00000471987 VPS28Q9UK41 221 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
CD46-213ENST00000471987 IGHV3-20A0A0C4DH32 117 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 A8MV72 311 aaPredicted RBP3.51□□□□□ -1.85
CD46-213ENST00000471987 SNX3O60493 162 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 GJB3O75712 270 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 KLK2P20151 261 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 PAX3P23760 479 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 ATP4BP51164 291 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 KIAA0141Q14154 515 aaPredicted RBP3.51□□□□□ -1.85
CD46-213ENST00000471987 FGD3Q5JSP0 725 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 RSBN1Q5VWQ0 802 aaPredicted RBP3.51□□□□□ -1.85
CD46-213ENST00000471987 RCOR2Q8IZ40 523 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 RASGEF1AQ8N9B8 481 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 SPPL2AQ8TCT8 520 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 ZNF830Q96NB3 372 aaPredicted RBP3.51□□□□□ -1.85
CD46-213ENST00000471987 DNAI2Q9GZS0 605 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 SLITRK2Q9H156 845 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 NOL11Q9H8H0 719 aaKnown RBP3.51□□□□□ -1.85
CD46-213ENST00000471987 POMT2Q9UKY4 750 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 RNF150Q9ULK6 438 aa3.51□□□□□ -1.85
CD46-213ENST00000471987 MYH14Q7Z406 1995 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms