RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 UGT3A1Q6NUS8 523 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 C2CD4AQ8NCU7 369 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 LMF1Q96S06 567 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 NDNQ99608 321 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 TGIF2Q9GZN2 237 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 CCDC177Q9NQR7 707 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 ERRFI1Q9UJM3 462 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 MDC1Q14676 2089 aaKnown RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 A1L4Q6 167 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 EEF1A2Q05639 463 aaKnown RBP21.4■■□□□ 1.02
C9orf3-213ENST00000471978 CDC16Q13042 620 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 TLR1Q15399 786 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 NDUFA9Q16795 377 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 SYT16Q17RD7 645 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 FAAH2Q6GMR7 532 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 LRRC8EQ6NSJ5 796 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 MCOLN3Q8TDD5 553 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 EEF1AKMT1Q8WVE0 214 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 TMEM184CQ9NVA4 438 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 ASIC3Q9UHC3 531 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 ADAMTS6Q9UKP5 1117 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 SNX12Q9UMY4 172 aa21.4■■□□□ 1.02
C9orf3-213ENST00000471978 STATHP02808 62 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 PRR35P0CG20 571 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 HRH2P25021 359 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 RGS4P49798 205 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 TBPL1P62380 186 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 TIAL1Q01085 375 aaKnown RBP eCLIP21.39■■□□□ 1.01
C9orf3-213ENST00000471978 DHX9Q08211 1270 aaKnown RBP21.39■■□□□ 1.01
C9orf3-213ENST00000471978 FAM53BQ14153 422 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 B3GNTL1Q67FW5 361 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-213ENST00000471978 PALM2Q8IXS6 379 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 GABPB2Q8TAK5 448 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-213ENST00000471978 GRHL3Q8TE85 626 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 CCDC138Q96M89 665 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 TAS2R13Q9NYV9 303 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 PDE10AQ9Y233 779 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 SLC5A6Q9Y289 635 aa21.39■■□□□ 1.01
C9orf3-213ENST00000471978 IGHV1-45A0A0A0MS14 117 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 A0A1W2PQ72 361 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 CES2O00748 559 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 DNALI1O14645 258 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 PCDH17O14917 1159 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 ZSCAN12O43309 604 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 BANF1O75531 89 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 TTC4O95801 387 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 C8GP07360 202 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 FDXRP22570 491 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 AVPR1BP47901 424 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 RPS15AP62244 130 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 MAT1AQ00266 395 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 ZC3H7AQ8IWR0 971 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 ST6GALNAC3Q8NDV1 305 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 CATSPER1Q8NEC5 780 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 BRIX1Q8TDN6 353 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 PSMF1Q92530 271 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 PCBD2Q9H0N5 130 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 DDX47Q9H0S4 455 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 PARVBQ9HBI1 364 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 PTGFRNQ9P2B2 879 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 MKL2Q9ULH7 1088 aa21.38■■□□□ 1.01
C9orf3-213ENST00000471978 MRPS2Q9Y399 296 aaKnown RBP21.38■■□□□ 1.01
C9orf3-213ENST00000471978 NOTCH2Q04721 2471 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 KCNE1BA0A087WTH5 132 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 WIPF3A6NGB9 483 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 LDLRP01130 860 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 SERPINA7P05543 415 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 GABRB3P28472 473 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 SNRPNP63162 240 aaKnown RBP21.37■■□□□ 1.01
C9orf3-213ENST00000471978 ARG2P78540 354 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 MSS51Q4VC12 460 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 SPANXN3Q5MJ09 141 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 RBM20Q5T481 1227 aaKnown RBP21.37■■□□□ 1.01
C9orf3-213ENST00000471978 PAQR3Q6TCH7 311 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 MBOAT1Q6ZNC8 495 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 VN1R4Q7Z5H5 301 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 PCGF5Q86SE9 256 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 MYO1HQ8N1T3 1032 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 OR9A4Q8NGU2 314 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 C5orf34Q96MH7 638 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 NAT9Q9BTE0 207 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 RIC8BQ9NVN3 520 aa21.37■■□□□ 1.01
C9orf3-213ENST00000471978 LOC102723996A0A087X1L8 192 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 SOX11P35716 441 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 CDKN2DP55273 166 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 SP140Q13342 867 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 AGTRAPQ6RW13 159 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 TMEM205Q6UW68 189 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 SIRT6Q8N6T7 355 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 OR1N1Q8NGS0 311 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 FAR1Q8WVX9 515 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 ALKBH8Q96BT7 664 aaKnown RBP21.36■■□□□ 1.01
C9orf3-213ENST00000471978 THAP11Q96EK4 314 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 MACROD1Q9BQ69 325 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 ZNF700Q9H0M5 742 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 ATG10Q9H0Y0 220 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 PLA2G3Q9NZ20 509 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 SH2B3Q9UQQ2 575 aa21.36■■□□□ 1.01
C9orf3-213ENST00000471978 CRYBG3Q68DQ2 2970 aa21.35■■□□□ 1.01
C9orf3-213ENST00000471978 DYTNA2CJ06 578 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms