RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 LCA5Q86VQ0 697 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 FBXW8Q8N3Y1 598 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 KLHDC1Q8N7A1 406 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 SMYD1Q8NB12 490 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 RBM18Q96H35 190 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 PRMT1Q99873 361 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 RTP3Q9BQQ7 232 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 SF3B5Q9BWJ5 86 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 TMEM245Q9H330 911 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 UBQLN3Q9H347 655 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 RPF1Q9H9Y2 349 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 APOBEC3GQ9HC16 384 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 NDUFA13Q9P0J0 144 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 KCNJ14Q9UNX9 436 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 EXOC7Q9UPT5 735 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 VDAC3Q9Y277 283 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 PLEKHA6Q9Y2H5 1048 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 ZNF804BA4D1E1 1349 aa6.14□□□□□ -1.43
SMC5-202ENST00000471372 WDR33Q9C0J8 1336 aaKnown RBP6.14□□□□□ -1.43
SMC5-202ENST00000471372 TRAV18A0A075B6X5 111 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 NPIPA3F8WFD2 350 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 AKAP8O43823 692 aaKnown RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 PEX11AO75192 247 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 PDE9AO76083 593 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 PAPSS2O95340 614 aaPredicted RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 DIRAS3O95661 229 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 CDH1P12830 882 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 F3P13726 295 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 ZNF23P17027 643 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 NR1D1P20393 614 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 ACAA2P42765 397 aaKnown RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 PGGT1BP53609 377 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 CETN1Q12798 172 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 ETFDHQ16134 617 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 ASPRV1Q53RT3 343 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 FUT10Q6P4F1 479 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 PSRC1Q6PGN9 363 aaPredicted RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 DLEU7Q6UYE1 221 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 MACC1Q6ZN28 852 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 DCP1BQ8IZD4 617 aaKnown RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 EID3Q8N140 333 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 ZNF441Q8N8Z8 693 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 GGHQ92820 318 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 SLCO4A1Q96BD0 722 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 TRIM44Q96DX7 344 aaPredicted RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 MAP3K3Q99759 626 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 URM1Q9BTM9 101 aaKnown RBP6.13□□□□□ -1.43
SMC5-202ENST00000471372 TEX13BQ9BXU2 312 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 IL25Q9H293 177 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 UBTD1Q9HAC8 227 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 STUB1Q9UNE7 303 aa6.13□□□□□ -1.43
SMC5-202ENST00000471372 H3BMM5 538 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 H3BNX3 289 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 CYR61O00622 381 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 SOCS2O14508 198 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 PSMD3O43242 534 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 BAG4O95429 457 aaKnown RBP6.12□□□□□ -1.43
SMC5-202ENST00000471372 PGK2P07205 417 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 HOXC6P09630 235 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 CDH3P22223 829 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 AKT2P31751 481 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 ASMTP46597 345 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 HUNKP57058 714 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 RPL24P83731 157 aaKnown RBP6.12□□□□□ -1.43
SMC5-202ENST00000471372 PRKCEQ02156 737 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 CTR9Q6PD62 1173 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 TAF8Q7Z7C8 310 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 STHQ8IWL8 128 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 TBC1D21Q8IYX1 336 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 THEM5Q8N1Q8 247 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 OR1J1Q8NGS3 322 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 OR4A16Q8NH70 328 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 RPL36ALQ969Q0 106 aaKnown RBP6.12□□□□□ -1.43
SMC5-202ENST00000471372 ESAMQ96AP7 390 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 ALG14Q96F25 216 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 C16orf58Q96GQ5 468 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 VPS39Q96JC1 886 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 C17orf77Q96MU5 243 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 ASCL2Q99929 193 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 ALKBH7Q9BT30 221 aaPredicted RBP6.12□□□□□ -1.43
SMC5-202ENST00000471372 NTMT1Q9BV86 223 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 FAM212BQ9NTI7 297 aaPredicted RBP6.12□□□□□ -1.43
SMC5-202ENST00000471372 SLC35D1Q9NTN3 355 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 PIGVQ9NUD9 493 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 ZDHHC2Q9UIJ5 367 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 SH3GLB1Q9Y371 365 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 TMED7Q9Y3B3 224 aa6.12□□□□□ -1.43
SMC5-202ENST00000471372 CKAP5Q14008 2032 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 ANKRD61A6NGH8 418 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 SLC15A5A6NIM6 579 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 E5RGE8 158 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 SLC28A1O00337 649 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 SCO2O43819 266 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 ATP6V1G1O75348 118 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 CXCL10P02778 98 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 SLPIP03973 132 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 PRSS2P07478 247 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 CHRNGP07510 517 aa6.11□□□□□ -1.43
SMC5-202ENST00000471372 MMP10P09238 476 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms