RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MYO1DO94832 1006 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 ETHE1O95571 254 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 NPPAP01160 153 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CSF2P04141 144 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 IL6P05231 212 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CHRM5P08912 532 aaPredicted RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 CTSEP14091 401 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 XRCC1P18887 633 aaPredicted RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 BCKDHBP21953 392 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 HRH2P25021 359 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 GSTM2P28161 218 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS52-216ENST00000471309 SLC19A1P41440 591 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CLDN8P56748 225 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 NXPH1P58417 271 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 RPS13P62277 151 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 UBE2IP63279 158 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 YBX1P67809 324 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 MEF2AQ02078 507 aaPredicted RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 TLR1Q15399 786 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 GALNT18Q6P9A2 607 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 PRR23BQ6ZRT6 265 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 RBM12BQ8IXT5 1001 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS52-216ENST00000471309 FBXW8Q8N3Y1 598 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 RNF175Q8N4F7 328 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 DPP10Q8N608 796 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 DEFB119Q8N690 84 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 OR2L3Q8NG85 312 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CHTF18Q8WVB6 975 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 STARD8Q92502 1023 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 VPS33AQ96AX1 596 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 TESCQ96BS2 214 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 APOLD1Q96LR9 279 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 HOPXQ9BPY8 73 aaPredicted RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 GPATCH1Q9BRR8 931 aaKnown RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 DPY30Q9C005 99 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 DUSP15Q9H1R2 295 aaPredicted RBP9.02□□□□□ -0.97
VPS52-216ENST00000471309 CLMPQ9H6B4 373 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 SPAG4Q9NPE6 437 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 TMEM184CQ9NVA4 438 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 GID8Q9NWU2 228 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CROTQ9UKG9 612 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 MAPRE3Q9UPY8 281 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 INVSQ9Y283 1065 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 PCDHGA7Q9Y5G6 932 aa9.02□□□□□ -0.97
VPS52-216ENST00000471309 CEP192Q8TEP8 1941 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TP53BP1Q12888 1972 aaPredicted RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 EYSQ5T1H1 3165 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 IGKV1-8A0A0C4DH67 115 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TRBC2A0A5B9 178 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 VILLO15195 856 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 PDE5AO76074 875 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SEMA3DO95025 777 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 TDGF1P13385 188 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 JUNDP17535 347 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 PRPS1L1P21108 318 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TACR1P25103 407 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 CMPK1P30085 196 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 DPP6P42658 865 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 ACTR3P61158 418 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 CSNK1G2P78368 415 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 RAE1P78406 368 aaKnown RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 DMWDQ09019 674 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 GPR18Q14330 331 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 KIR2DS3Q14952 304 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TCEA2Q15560 299 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 DPY19L1Q2PZI1 675 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SPATS1Q496A3 300 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 ZNF542PQ5EBM4 170 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 PRRT3Q5FWE3 981 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 PIGGQ5H8A4 983 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 WDR45BQ5MNZ6 344 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 LAYNQ6UX15 382 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TAF8Q7Z7C8 310 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SYT12Q8IV01 421 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 RIMKLAQ8IXN7 391 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 ADGRF3Q8IZF5 1079 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 METTL4Q8N3J2 472 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 MINDY1Q8N5J2 469 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 C1orf52Q8N6N3 182 aaKnown RBP9.01□□□□□ -0.97
VPS52-216ENST00000471309 AVL9Q8NBF6 648 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 ZNF740Q8NDX6 193 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TTLQ8NG68 377 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 WDR60Q8WVS4 1066 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SLC13A3Q8WWT9 602 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 SLC22A18Q96BI1 424 aa9.01□□□□□ -0.97
VPS52-216ENST00000471309 TMEM74Q96NL1 305 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms