RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 TSC22D4Q9Y3Q8 395 aa11.15□□□□□ -0.62
FN1-217ENST00000471193 TIMM22Q9Y584 194 aa11.15□□□□□ -0.62
FN1-217ENST00000471193 DNAJC15Q9Y5T4 150 aa11.15□□□□□ -0.62
FN1-217ENST00000471193 ADAMTS20P59510 1910 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 IGHV5-51A0A0C4DH38 117 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 SLCO1B7G3V0H7 640 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 MANBAO00462 879 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 FFAR3O14843 346 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 TOX3O15405 576 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 GPR42O15529 346 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 RFPL3O75679 317 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 TGDSO95455 350 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 KRT6AP02538 564 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 KRT6BP04259 564 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 ANKRD34CP0C6C1 535 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 KITP10721 976 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 THRAP10827 490 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 ALOX15P16050 662 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 GRK3P35626 688 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 BCL6P41182 706 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 SCTRP47872 440 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 KRT6CP48668 564 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 SEC24CP53992 1094 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 RELAQ04206 551 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 HIST2H2ACQ16777 129 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 C10orf62Q5T681 223 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 CACHD1Q5VU97 1274 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 FRG2Q64ET8 278 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 HIST2H2AA3Q6FI13 130 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 TMIGD1Q6UXZ0 262 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 ZNF574Q6ZN55 896 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 MAVSQ7Z434 540 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 PLD3Q8IV08 490 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.14□□□□□ -0.63
FN1-217ENST00000471193 DEFB124Q8NES8 71 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 TWIST2Q8WVJ9 160 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 USP7Q93009 1102 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 UBE2E3Q969T4 207 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 REPS1Q96D71 796 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 FRG2BQ96QU4 278 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 GFM1Q96RP9 751 aaKnown RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 CHRNA10Q9GZZ6 450 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 NSRP1Q9H0G5 558 aaKnown RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 TUBB1Q9H4B7 451 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 ZNF768Q9H5H4 540 aaKnown RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 TOR4AQ9NXH8 423 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 VTI1BQ9UEU0 232 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 KLHL3Q9UH77 587 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 PILRAQ9UKJ1 303 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 ZNF490Q9ULM2 529 aaPredicted RBP11.14□□□□□ -0.63
FN1-217ENST00000471193 SNX6Q9UNH7 406 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 BTRCQ9Y297 605 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 PCDHGA11Q9Y5H2 935 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
FN1-217ENST00000471193 IGHV5-10-1A0A0J9YXX1 117 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 FEZF1A0PJY2 475 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 SLC9B1P1A6NJY1 282 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 ZNF195O14628 629 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 PIP5K1BO14986 540 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 HDAC3O15379 428 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 PRAMEF10O60809 474 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 CTSVO60911 334 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 SKAP2O75563 359 aaPredicted RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 RASSF9O75901 435 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 ZBTB11O95625 1053 aaPredicted RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 CHEK2O96017 543 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
FN1-217ENST00000471193 CSRP1P21291 193 aaKnown RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 DRD4P21917 467 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 GSTM2P28161 218 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 SERPINB3P29508 390 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 SERPINB1P30740 379 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 MLLT3P42568 568 aaPredicted RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 PDX1P52945 283 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 INHBCP55103 352 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 RPS15AP62244 130 aaKnown RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 BTKQ06187 659 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 ZNF33BQ06732 778 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 CYP4F3Q08477 520 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 IFT88Q13099 833 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 SPIDRQ14159 915 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 TRIP6Q15654 476 aaKnown RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 XKR7Q5GH72 579 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 ADNP2Q6IQ32 1131 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 VN1R5Q7Z5H4 357 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 KMT5CQ86Y97 462 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 WDR75Q8IWA0 830 aaKnown RBP11.13□□□□□ -0.63
FN1-217ENST00000471193 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 TBC1D19Q8N5T2 526 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 ANKRD53Q8N9V6 530 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 TTLQ8NG68 377 aa11.13□□□□□ -0.63
FN1-217ENST00000471193 KLHL6Q8WZ60 621 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms