RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 AMER3Q8N944 861 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 MCOLN3Q8TDD5 553 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 C1orf54Q8WWF1 131 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 FAM136AQ96C01 138 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 LURAP1Q96LR2 239 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 EIF2B3Q9NR50 452 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-208ENST00000470737 A8MUI8 341 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 ARHGEF33A8MVX0 844 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 MYO1CO00159 1063 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 TTI1O43156 1089 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 SLC19A2O60779 497 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 NIPSNAP2O75323 286 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 PSIP1O75475 530 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 VAPBO95292 243 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 ESR1P03372 595 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 NMBRP28336 390 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 ABATP80404 500 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 BASP1P80723 227 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 FAM53BQ14153 422 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 C4orf22Q6V702 233 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 ZC3H7AQ8IWR0 971 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 TCF12Q99081 682 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
SEMA3F-208ENST00000470737 F8P00451 2351 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 FOXS1O43638 330 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 SEC24DO94855 1032 aaPredicted RBP13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 SYF2O95926 243 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 CYC1P08574 325 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 PMP22Q01453 160 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 RELAQ04206 551 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 SRSF11Q05519 484 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 GBX1Q14549 363 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 CCNG2Q16589 344 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 KLHL38Q2WGJ6 581 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 TTLL9Q3SXZ7 439 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 MINDY4Q4G0A6 757 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 ZNF425Q6IV72 752 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 CPEB2Q7Z5Q1 589 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 BIRC8Q96P09 236 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 PKP4Q99569 1192 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 HOMER3Q9NSC5 361 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 CRYL1Q9Y2S2 319 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 POLQO75417 2590 aa13.13□□□□□ -0.31
SEMA3F-208ENST00000470737 OTOGQ6ZRI0 2925 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 IGKV1-8A0A0C4DH67 115 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 GOLGA8KD6RF30 607 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 H0YIG0 161 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 GOLGA8TH3BQL2 631 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 SMAPO00193 183 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 ZSCAN5DPP0CG00 497 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 PAMP19021 973 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 AGAP20933 346 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 MGAT1P26572 445 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 RPL22P35268 128 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 ADARP55265 1226 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 ALDH6A1Q02252 535 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 TYSND1Q2T9J0 566 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 ACSBG2Q5FVE4 666 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 PLAG1Q6DJT9 500 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 GSTA5Q7RTV2 222 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 FAM98AQ8NCA5 519 aaKnown RBP13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 PBKQ96KB5 322 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 VN1R1Q9GZP7 353 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 CCDC68Q9H2F9 335 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 SYBUQ9NX95 663 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 ITGB1BP2Q9UKP3 347 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 PCDHGB6Q9Y5F9 930 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
SEMA3F-208ENST00000470737 NCOA6Q14686 2063 aaPredicted RBP13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 CES2O00748 559 aa13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 HAT1O14929 419 aa13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 P2RX6O15547 441 aa13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 NSA2O95478 260 aaKnown RBP13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 SLC16A8O95907 504 aa13.11□□□□□ -0.31
SEMA3F-208ENST00000470737 CD46P15529 392 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms