RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 IL17CQ9P0M4 197 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 TEKT2Q9UIF3 430 aa8.51□□□□□ -1.05
SYNGAP1-205ENST00000470232 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 OR5H15A6NDH6 313 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 E9PLN8 166 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAM227AF5H4B4 570 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 STX7O15400 261 aaKnown RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TSPAN12O95859 305 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 WDPCPO95876 746 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 CD48P09326 243 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZSCAN5DPP0CG00 497 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ETS1P14921 441 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TCF4P15884 667 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ABOP16442 354 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ALDH6A1Q02252 535 aaKnown RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 SLC25A11Q02978 314 aaKnown RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 RPA4Q13156 261 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRKG2Q13237 762 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 GRM7Q14831 915 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 MORF4L2Q15014 288 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZIC1Q15915 447 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TFDP3Q5H9I0 405 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZC3H12BQ5HYM0 836 aaKnown RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TCTE1Q5JU00 501 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 ABHD17BQ5VST6 288 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TXNRD3NBQ6F5E7 133 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 CNSTQ6PJW8 725 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 UNC5AQ6ZN44 842 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 SHISA6Q6ZSJ9 500 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 CENPUQ71F23 418 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 GLT6D1Q7Z4J2 308 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TDRPQ86YL5 185 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 SIRT6Q8N6T7 355 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 DNAAF3Q8N9W5 541 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 MAGEC3Q8TD91 643 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 TFGQ92734 400 aaPredicted RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 SDCCAG3Q96C92 435 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 GPR137Q96N19 417 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 OR2A14Q96R47 310 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 VKORC1Q9BQB6 163 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 FRMD8P1Q9BZ68 369 aaPredicted RBP8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 XKR8Q9H6D3 395 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 PPCSQ9HAB8 311 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 CUTCQ9NTM9 273 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 STMN3Q9NZ72 180 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 OR6C2Q9NZP2 312 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 POLG2Q9UHN1 485 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 BAIAP2L1Q9UHR4 511 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPO11Q9Y5K1 396 aa8.5□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRRC2AP48634 2157 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 VSTM2BA6NLU5 285 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ISM1B1AKI9 464 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PRRG2O14669 202 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PPP1R12AO14974 1030 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 HCRTR1O43613 425 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 MGRN1O60291 552 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPAG7O75391 227 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZWINTO95229 277 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ATP6V1G2O95670 118 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 IFNB1P01574 187 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 EPOP01588 193 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 CHRM5P08912 532 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 GSTM1P09488 218 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 EZRP15311 586 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PECAM1P16284 738 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 KRT15P19012 456 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 TAC1P20366 129 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PHBP35232 272 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 CDKN2BP42772 138 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ARL4CP56559 192 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 TMPRSS15P98073 1019 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 GSTM4Q03013 218 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 GBE1Q04446 702 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 LTBQ06643 244 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZBTB17Q13105 803 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 BOP1Q14137 746 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 MPP2Q14168 576 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 SPARCL1Q14515 664 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 KIR2DS3Q14952 304 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PDK1Q15118 436 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 CDSNQ15517 529 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 GALNTL6Q49A17 601 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ZNF766Q5HY98 468 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 RNASEH2BQ5TBB1 312 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 HHATQ5VTY9 493 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 ATG9BQ674R7 924 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 NLRP9Q7RTR0 991 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 PCGF5Q86SE9 256 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 BIVMQ86UB2 503 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 TRIM73Q86UV7 250 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 TRABD2AQ86V40 505 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 RFX6Q8HWS3 928 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 MCATQ8IVS2 390 aaKnown RBP8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 FAM20CQ8IXL6 584 aa8.49□□□□□ -1.05
SYNGAP1-205ENST00000470232 TAB3Q8N5C8 712 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms