RNA–Protein interactions for RNA: ENST00000470150.5

CHRD-212, Transcript of chordin, human

TSL 2

Gene CHRD, Length 4,234 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-212	ENST00000470150	LRTM1	Q9HBL6	345 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	KLHL20	Q9Y2M5	609 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	RNF11	Q9Y3C5	154 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	LRRC14B	A6NHZ5	514 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	GFRA2	O00451	464 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	BCAT2	O15382	392 aa	Predicted RBP	13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	ZNF682	O95780	498 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	OLFM2	O95897	454 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	NTS	P30990	170 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	PTPN5	P54829	565 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	WSCD2	Q2TBF2	565 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	FGD3	Q5JSP0	725 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	CYS1	Q717R9	158 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	GATAD2A	Q86YP4	633 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	LMNTD1	Q8N9Z9	388 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	OR9A1P	Q8NGU1	263 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	PEX13	Q92968	403 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	EXOSC8	Q96B26	276 aa	Known RBP	13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	OTULIN	Q96BN8	352 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	KCNA7	Q96RP8	456 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	RANBP9	Q96S59	729 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	AKTIP	Q9H8T0	292 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	LTB4R2	Q9NPC1	389 aa		13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	SMPD3	Q9NY59	655 aa	Predicted RBP	13.79	□□□□□ -0.2
CHRD-212	ENST00000470150	AP2A2	O94973	939 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	IMPDH2	P12268	514 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	LHCGR	P22888	699 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	GGT5	P36269	586 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	AP1S2	P56377	157 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	LIPE	Q05469	1076 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	STX4	Q12846	297 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	HERC3	Q15034	1050 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	INAVA	Q3KP66	663 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	THOC6	Q86W42	341 aa	Known RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	ZDHHC13	Q8IUH4	622 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	SLC22A18	Q96BI1	424 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	CENPN	Q96H22	339 aa	Predicted RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	TMEM74	Q96NL1	305 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	MCMBP	Q9BTE3	642 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	RAD21L1	Q9H4I0	556 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	AHCTF1	Q8WYP5	2266 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	PRSS51	A0A1B0GVH4	220 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	MOSPD3	O75425	235 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	ANXA4	P09525	319 aa	Predicted RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	HK2	P52789	917 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	SRP54	P61011	504 aa	Known RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	PTS	Q03393	145 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	MLIP	Q5VWP3	458 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	RHBDD1	Q8TEB9	315 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	PLEKHA8	Q96JA3	519 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	EQTN	Q9NQ60	294 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	MARK1	Q9P0L2	795 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	PCDHGA7	Q9Y5G6	932 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	PCDHGA11	Q9Y5H2	935 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	LOC730098	B7Z3J9	87 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	SLC28A1	O00337	649 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	CLK1	P49759	484 aa	Known RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	HHEX	Q03014	270 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	MAPKAPK3	Q16644	382 aa		13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	METTL27	Q8N6F8	245 aa	Predicted RBP	13.78	□□□□□ -0.2
CHRD-212	ENST00000470150	TTC36	A6NLP5	189 aa		13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	NPHS1	O60500	1241 aa		13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	MLLT3	P42568	568 aa	Predicted RBP	13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	ZNF140	P52738	457 aa	Predicted RBP	13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	UBALD2	Q8IYN6	164 aa		13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	CENPL	Q8N0S6	344 aa	Predicted RBP	13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	ATOH1	Q92858	354 aa	Predicted RBP	13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	SLC6A18	Q96N87	628 aa		13.77	□□□□□ -0.2
CHRD-212	ENST00000470150	NDUFS4	O43181	175 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	GSN	P06396	782 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	CSTF2	P33240	577 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	TTK	P33981	857 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	BMP8B	P34820	402 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	CSNK1D	P48730	415 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	MAPK12	P53778	367 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	BROX	Q5VW32	411 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	PRMT9	Q6P2P2	845 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	RASGRP3	Q8IV61	690 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	KIAA1191	Q96A73	305 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	SLC32A1	Q9H598	525 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	GPN3	Q9UHW5	284 aa	Predicted RBP	13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	PRSS21	Q9Y6M0	314 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150		A0A1B0GVT2	93 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	VPS4B	O75351	444 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	CDH1	P12830	882 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	CCR4	P51679	360 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	C2orf80	Q0P641	193 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	TRIM61	Q5EBN2	209 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	TMEM215	Q68D42	235 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	GPR180	Q86V85	440 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	EXD2	Q9NVH0	621 aa		13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	MRPS33	Q9Y291	106 aa	Known RBP	13.77	□□□□□ -0.21
CHRD-212	ENST00000470150	LINC00854	A0A1B0GVQ3	168 aa		13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	RSL1D1	O76021	490 aa	Known RBP	13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	SNAP29	O95721	258 aa		13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	NUDT14	O95848	222 aa		13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	ZNF26	P17031	533 aa	Predicted RBP	13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	SERPINB1	P30740	379 aa		13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	MMP12	P39900	470 aa		13.76	□□□□□ -0.21
CHRD-212	ENST00000470150	CRAT	P43155	626 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms