RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 BTBD3Q9Y2F9 522 aa13.21□□□□□ -0.3
BRCA1-209ENST00000470026 HTTP42858 3142 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 A0A1W2PQ67 120 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 OR2A25A4D2G3 310 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 CLDN24A6NM45 220 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 MYO1GB0I1T2 1018 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 H0YIV9 168 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 AP2A2O94973 939 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 DIRAS1O95057 198 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 C9P02748 559 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 COX7A2P14406 83 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 ITPKAP23677 461 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 KRT20P35900 424 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 TGFBR2P37173 567 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 STK19P49842 368 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-209ENST00000470026 ST13P50502 369 aaKnown RBP13.2□□□□□ -0.3
BRCA1-209ENST00000470026 RPS3AP61247 264 aaKnown RBP13.2□□□□□ -0.3
BRCA1-209ENST00000470026 IFITM3Q01628 133 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 NPRL3Q12980 569 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 E2F2Q14209 437 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 MLIPQ5VWP3 458 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 TRIM74Q86UV6 250 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 TRIM73Q86UV7 250 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 CLECL1Q8IZS7 167 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 ALOXE3Q9BYJ1 711 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 ASPSCR1Q9BZE9 553 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 REEP1Q9H902 201 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 TPT1P8Q9HAU6 139 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
BRCA1-209ENST00000470026 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 PADI2Q9Y2J8 665 aa13.2□□□□□ -0.3
BRCA1-209ENST00000470026 M0R3G1 203 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 SCAMP2O15127 329 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 MAN1A2O60476 641 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 GSTM1P09488 218 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 LAMP1P11279 417 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 HOXD10P28358 340 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 SERPINB10P48595 397 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 IRF8Q02556 426 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 SMN1Q16637 294 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 HIST2H2ACQ16777 129 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 GRHL2Q6ISB3 625 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 TSEN54Q7Z6J9 526 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 GALNT10Q86SR1 603 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 DPH2Q9BQC3 489 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 SLIRPQ9GZT3 109 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ATG10Q9H0Y0 220 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 BRF2Q9HAW0 419 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ANKHQ9HCJ1 492 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 CFAP97Q9P2B7 532 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 B4GALT6Q9UBX8 382 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PABPN1LA6NDY0 278 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 FAM20BO75063 409 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ADAM23O75077 832 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PSIP1O75475 530 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 POP4O95707 220 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 INHAP05111 366 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 BMP4P12644 408 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 TGM1P22735 817 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PPIBP23284 216 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PCGF2P35227 344 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 DCDC1P59894 354 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 RAE1P78406 368 aaKnown RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-209ENST00000470026 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 TRIM16LQ309B1 348 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 FAM124AQ86V42 546 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ENTHD1Q8IYW4 607 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 COQ8BQ96D53 544 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 SCLYQ96I15 445 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 HHIPL1Q96JK4 782 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 ARMC7Q9H6L4 198 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 OSGIN1Q9UJX0 560 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 MAPRE3Q9UPY8 281 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 CORO2BQ9UQ03 480 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 PCDHGA6Q9Y5G7 932 aa13.19□□□□□ -0.3
BRCA1-209ENST00000470026 KRBA1A5PL33 1030 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 KRT87PA6NCN2 255 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TMEM221A6NGB7 291 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
BRCA1-209ENST00000470026 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms