RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 NOVA2Q9UNW9 492 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 SH2B3Q9UQQ2 575 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 MRPS2Q9Y399 296 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 POLEQ07864 2286 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 KCNE1BA0A087WTH5 132 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 H7BY64 318 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 FFAR3O14843 346 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 GPR42O15529 346 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 CBX6O95503 412 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 AHSGP02765 367 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 HRH2P25021 359 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 RGS4P49798 205 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 EFNA3P52797 238 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 CDKN2DP55273 166 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 PHKG1Q16816 387 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 THEMIS2Q5TEJ8 643 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 IRAK1BP1Q5VVH5 260 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 PAQR3Q6TCH7 311 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 MBOAT1Q6ZNC8 495 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 ADCK2Q7Z695 626 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 ZC3H7AQ8IWR0 971 aaKnown RBP15.48■□□□□ 0.07
COL9A3-208ENST00000469802 GABPB2Q8TAK5 448 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-208ENST00000469802 MCOLN3Q8TDD5 553 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 SSC4DQ8WTU2 575 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 MMABQ96EY8 250 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-208ENST00000469802 THOC3Q96J01 351 aaKnown RBP15.48■□□□□ 0.07
COL9A3-208ENST00000469802 CCDC138Q96M89 665 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 PRAP1Q96NZ9 151 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 SGPP1Q9BX95 441 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 PCBD2Q9H0N5 130 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 ZNF160Q9HCG1 818 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 ABCF3Q9NUQ8 709 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 TMEM184CQ9NVA4 438 aa15.48■□□□□ 0.07
COL9A3-208ENST00000469802 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
COL9A3-208ENST00000469802 LOC102723996A0A087X1L8 192 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 IGHV1-45A0A0A0MS14 117 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 A0A0A6YYC8 382 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 USP27XA6NNY8 438 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 I3L1I5 382 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 PCDH17O14917 1159 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 SLC16A5O15375 505 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 SOX11P35716 441 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 TSFMP43897 325 aaKnown RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 RPS15AP62244 130 aaKnown RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 MFAP5Q13361 173 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 MORF4L2Q15014 288 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 NR6A1Q15406 480 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 ZXDCQ2QGD7 858 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 EIF2S3LQ2VIR3 472 aaKnown RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 B3GNTL1Q67FW5 361 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-208ENST00000469802 STEAP4Q687X5 459 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 AGTRAPQ6RW13 159 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 NDUFAF7Q7L592 441 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 PSMF1Q92530 271 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 PARVBQ9HBI1 364 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 MAP10Q9P2G4 905 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 SLC17A6Q9P2U8 582 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 ZGRF1Q86YA3 2104 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 UNC79Q9P2D8 2635 aa15.47■□□□□ 0.07
COL9A3-208ENST00000469802 NSG1A0A0A6YYJ2 146 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 H0YIG0 161 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TP73O15350 636 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 KLHL18O94889 574 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 ANXA5P08758 320 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 PRR35P0CG20 571 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 FDXRP22570 491 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 EMP2P54851 167 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 CSNK1G2P78368 415 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 ZNF169Q14929 603 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-208ENST00000469802 SYT16Q17RD7 645 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TEDDM1Q5T9Z0 273 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TMEM214Q6NUQ4 689 aaKnown RBP15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TMEM205Q6UW68 189 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 ISLR2Q6UXK2 745 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 SYDE1Q6ZW31 735 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-208ENST00000469802 CREG2Q8IUH2 290 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 MYO1HQ8N1T3 1032 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TM4SF19Q96DZ7 209 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 THAP11Q96EK4 314 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 LINGO1Q96FE5 620 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 LMF1Q96S06 567 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 EPS8L2Q9H6S3 715 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 LRRC4CQ9HCJ2 640 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 CORO1CQ9ULV4 474 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-208ENST00000469802 COPG1Q9Y678 874 aaKnown RBP15.46■□□□□ 0.07
COL9A3-208ENST00000469802 TEX264Q9Y6I9 313 aa15.46■□□□□ 0.07
COL9A3-208ENST00000469802 SVILO95425 2214 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 E2F3O00716 465 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 BMP10O95393 424 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 NSA2O95478 260 aaKnown RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 SERPINA7P05543 415 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 CYC1P08574 325 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 CCND1P24385 295 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 ELK3P41970 407 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 MAT1AQ00266 395 aaKnown RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 EEF1A2Q05639 463 aaKnown RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
COL9A3-208ENST00000469802 PCOLCEQ15113 449 aa15.45■□□□□ 0.06
COL9A3-208ENST00000469802 NDUFA9Q16795 377 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms