RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 AGAP11Q8TF27 550 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ANKRD49Q8WVL7 239 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 FERD3LQ96RJ6 166 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ZDHHC2Q9UIJ5 367 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TMEM184BQ9Y519 407 aaPredicted RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TLN1Q9Y490 2541 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 GOLGA8QA0A0J9YX86 632 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 C17orf113A0A1B0GUU1 675 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 GOLGA8OA6NCC3 632 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 GOLGA8NF8WBI6 632 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 DLGAP3O95886 979 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 FOLR1P15328 257 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 CD1DP15813 335 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ATP6V0D1P61421 351 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 NAA25Q14CX7 972 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SWT1Q5T5J6 900 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 ENDOVQ8N8Q3 282 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SIDT2Q8NBJ9 832 aaKnown RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 WBP1Q96G27 269 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 SLC12A9Q9BXP2 914 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 CCDC68Q9H2F9 335 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 GPN2Q9H9Y4 310 aaPredicted RBP16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TAS2R13Q9NYV9 303 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 TMCO1Q9UM00 188 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 CDYLQ9Y232 598 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 COLEC10Q9Y6Z7 277 aa16.99■□□□□ 0.31
MRPL28-208ENST00000469744 UBA6A0AVT1 1052 aaPredicted RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 TLCD2A6NGC4 264 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 IFRD1O00458 451 aaPredicted RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 TIAF1O95411 115 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 EBLN1P0CF75 366 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 TPBGLP0DKB5 382 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 ZNF37AP17032 561 aaPredicted RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 MAP4P27816 1152 aaKnown RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 PGM1P36871 562 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 NSG1P42857 185 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 PRKG2Q13237 762 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 PDAP1Q13442 181 aaKnown RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 VWA5B1Q5TIE3 1220 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 ARMC6Q6NXE6 501 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 FRMD7Q6ZUT3 714 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 SPATA6LQ8N4H0 392 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 CCNYL1Q8N7R7 359 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 EXD3Q8N9H8 876 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 GALNT6Q8NCL4 622 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 RBM15BQ8NDT2 890 aaKnown RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 SLC41A2Q96JW4 573 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 MAELQ96JY0 434 aaKnown RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 HGH1Q9BTY7 390 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 DERL2Q9GZP9 239 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 DENND2DQ9H6A0 471 aaPredicted RBP16.98■□□□□ 0.31
MRPL28-208ENST00000469744 RNPEPL1Q9HAU8 725 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 IL17BQ9UHF5 180 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 HEBP2Q9Y5Z4 205 aa16.98■□□□□ 0.31
MRPL28-208ENST00000469744 PEX11AO75192 247 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 AP2A2O94973 939 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 FAM87AP0C7U9 286 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ITGB6P18564 788 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 NDUFS1P28331 727 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ARL4DP49703 201 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 KLF10Q13118 480 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 BOP1Q14137 746 aaKnown RBP16.97■□□□□ 0.31
MRPL28-208ENST00000469744 IL11RAQ14626 422 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 HERC3Q15034 1050 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 TBR1Q16650 682 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 WLSQ5T9L3 541 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 NKAPQ8N5F7 415 aaKnown RBP16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ZFPM2Q8WW38 1151 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 LCN9Q8WX39 176 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ELMO1Q92556 727 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.97■□□□□ 0.31
MRPL28-208ENST00000469744 KIAA1191Q96A73 305 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 KIAA1143Q96AT1 154 aaPredicted RBP16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ARHGAP9Q9BRR9 750 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 SRMSQ9H3Y6 488 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 ZNF385DQ9H6B1 395 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 XKR8Q9H6D3 395 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 SEMA5BQ9P283 1151 aa16.97■□□□□ 0.31
MRPL28-208ENST00000469744 SPTBP11277 2137 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 SPTA1P02549 2419 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 GSAPA4D1B5 854 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 NKX2-8O15522 239 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 PRKAR1AP10644 381 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 PKMP14618 531 aaKnown RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 EZRP15311 586 aaKnown RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 NCF2P19878 526 aaPredicted RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 CPOXP36551 454 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 STAT5AP42229 794 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 RPA4Q13156 261 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 NET1Q7Z628 596 aaPredicted RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 PPP1R3BQ86XI6 285 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 OR52E1Q8NGJ3 308 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 ACTRT2Q8TDY3 377 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 TFGQ92734 400 aaPredicted RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 ANKRD27Q96NW4 1050 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 OR52B2Q96RD2 323 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 CD180Q99467 661 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 ALG9Q9H6U8 611 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms